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OPENSEQ.org

ISPA - NUSB
UniProt: P22939 - P0A780
Length: 438
Sequences: 474
Seq/Len: 1.11
I_Prob: 0.00

ISPA - Farnesyl diphosphate synthase
Paralog alert: 0.78 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ISPA ISPB
NUSB - N utilization substance protein B
Paralog alert: 0.76 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: NUSB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
251_P 108_I 1.27 0.00
94_L 21_Q 1.22 0.00
221_V 17_L 1.09 0.00
47_L 110_L 1.08 0.00
212_A 92_L 1.07 0.00
100_T 119_S 1.06 0.00
119_T 51_L 1.03 0.00
189_A 15_Q 1.00 0.00
142_I 108_I 0.98 0.00
145_L 98_V 0.98 0.00
218_A 47_Y 0.95 0.00
233_A 96_S 0.95 0.00
22_I 111_A 0.95 0.00
208_L 15_Q 0.95 0.00
118_Q 73_L 0.95 0.00
94_L 48_F 0.93 0.00
177_I 19_S 0.93 0.00
1_M 123_V 0.93 0.00
104_K 81_E 0.93 0.00
197_A 83_A 0.92 0.00
235_L 87_I 0.90 0.00
174_L 126_V 0.89 0.00
70_A 51_L 0.88 0.00
111_I 19_S 0.87 0.00
118_Q 76_E 0.87 0.00
215_I 126_V 0.87 0.00
39_G 73_L 0.86 0.00
208_L 30_V 0.86 0.00
188_A 88_A 0.86 0.00
40_A 82_K 0.85 0.00
103_V 129_K 0.85 0.00
251_P 15_Q 0.85 0.00
172_D 59_T 0.84 0.00
202_R 90_Y 0.84 0.00
91_D 117_E 0.84 0.00
251_P 121_K 0.84 0.00
70_A 13_A 0.83 0.00
225_I 62_L 0.83 0.00
297_R 108_I 0.83 0.00
165_E 131_A 0.83 0.00
98_L 113_S 0.81 0.00
102_H 13_A 0.81 0.00
15_N 46_L 0.81 0.00
3_F 103_A 0.81 0.00
53_Y 47_Y 0.80 0.00
21_F 103_A 0.80 0.00
298_N 126_V 0.80 0.00
285_S 85_L 0.80 0.00
294_I 113_S 0.79 0.00
238_R 115_G 0.79 0.00
196_S 73_L 0.79 0.00
299_K 131_A 0.78 0.00
35_T 108_I 0.78 0.00
22_I 114_F 0.78 0.00
189_A 134_I 0.78 0.00
118_Q 81_E 0.77 0.00
54_A 15_Q 0.77 0.00
126_S 14_V 0.77 0.00
94_L 70_L 0.77 0.00
42_L 128_D 0.77 0.00
194_A 87_I 0.77 0.00
211_Y 52_L 0.77 0.00
188_A 39_D 0.76 0.00
252_A 134_I 0.76 0.00
225_I 108_I 0.76 0.00
225_I 125_G 0.76 0.00
213_E 18_Y 0.76 0.00
193_G 17_L 0.76 0.00
73_V 115_G 0.76 0.00
227_D 122_F 0.75 0.00
106_G 11_E 0.75 0.00
197_A 81_E 0.75 0.00
176_R 62_L 0.75 0.00
146_A 119_S 0.75 0.00
173_A 70_L 0.74 0.00
82_I 85_L 0.74 0.00
22_I 89_L 0.74 0.00
111_I 97_D 0.74 0.00
186_I 125_G 0.74 0.00
211_Y 134_I 0.74 0.00
139_I 108_I 0.74 0.00
141_M 16_A 0.73 0.00
110_A 54_G 0.73 0.00
43_G 109_E 0.73 0.00
75_C 76_E 0.73 0.00
122_F 51_L 0.73 0.00
148_A 51_L 0.73 0.00
185_L 15_Q 0.73 0.00
101_C 81_E 0.72 0.00
40_A 130_A 0.72 0.00
177_I 51_L 0.72 0.00
253_L 116_A 0.72 0.00
262_K 114_F 0.72 0.00
274_L 126_V 0.72 0.00
76_I 19_S 0.72 0.00
36_M 111_A 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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