| UniProt: | P0A780 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10666 | ||
| Length: | 139 (133) | ||
| Sequences: | 2491 | ||
| Seq/Len: | 18.73 |
| NUSB
Paralog alert: 0.76 [within 20: 0.05] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 63_D | 86_R | 3.803 | 1.00 | |
| 54_G | 90_Y | 3.499 | 1.00 | |
| 89_L | 130_A | 2.715 | 1.00 | |
| 88_A | 107_A | 2.605 | 1.00 | |
| 58_N | 61_Y | 2.408 | 1.00 | |
| 13_A | 51_L | 2.15 | 1.00 | |
| 84_V | 111_A | 2.073 | 1.00 | |
| 112_K | 120_H | 2.056 | 1.00 | |
| 11_E | 113_S | 1.958 | 1.00 | |
| 129_K | 133_V | 1.946 | 1.00 | |
| 98_V | 103_A | 1.892 | 1.00 | |
| 129_K | 132_P | 1.838 | 1.00 | |
| 62_L | 90_Y | 1.782 | 1.00 | |
| 99_P | 102_V | 1.73 | 1.00 | |
| 70_L | 77_L | 1.729 | 1.00 | |
| 47_Y | 98_V | 1.679 | 1.00 | |
| 111_A | 123_V | 1.655 | 1.00 | |
| 14_V | 87_I | 1.601 | 1.00 | |
| 62_L | 89_L | 1.585 | 1.00 | |
| 93_S | 130_A | 1.581 | 1.00 | |
| 69_Y | 130_A | 1.554 | 1.00 | |
| 70_L | 122_F | 1.543 | 1.00 | |
| 15_Q | 114_F | 1.503 | 1.00 | |
| 65_L | 130_A | 1.452 | 1.00 | |
| 18_Y | 22_L | 1.441 | 1.00 | |
| 16_A | 48_F | 1.44 | 1.00 | |
| 79_Q | 82_K | 1.432 | 1.00 | |
| 61_Y | 94_K | 1.423 | 1.00 | |
| 58_N | 94_K | 1.418 | 1.00 | |
| 14_V | 83_A | 1.417 | 1.00 | |
| 105_N | 109_E | 1.406 | 0.99 | |
| 69_Y | 133_V | 1.395 | 0.99 | |
| 9_A | 48_F | 1.386 | 0.99 | |
| 50_E | 95_R | 1.36 | 0.99 | |
| 21_Q | 86_R | 1.356 | 0.99 | |
| 19_S | 23_S | 1.343 | 0.99 | |
| 13_A | 52_L | 1.331 | 0.99 | |
| 84_V | 107_A | 1.317 | 0.99 | |
| 92_L | 103_A | 1.293 | 0.99 | |
| 51_L | 87_I | 1.281 | 0.99 | |
| 108_I | 120_H | 1.279 | 0.99 | |
| 88_A | 103_A | 1.277 | 0.99 | |
| 104_I | 131_A | 1.276 | 0.99 | |
| 66_M | 89_L | 1.275 | 0.99 | |
| 49_R | 53_A | 1.272 | 0.99 | |
| 50_E | 90_Y | 1.238 | 0.98 | |
| 109_E | 112_K | 1.219 | 0.98 | |
| 21_Q | 82_K | 1.217 | 0.98 | |
| 67_K | 74_L | 1.206 | 0.98 | |
| 73_L | 76_E | 1.205 | 0.98 | |
| 100_Y | 131_A | 1.192 | 0.98 | |
| 20_W | 56_A | 1.17 | 0.97 | |
| 108_I | 124_N | 1.154 | 0.97 | |
| 11_E | 114_F | 1.142 | 0.97 | |
| 78_G | 81_E | 1.14 | 0.97 | |
| 71_S | 129_K | 1.134 | 0.97 | |
| 84_V | 123_V | 1.127 | 0.97 | |
| 68_P | 133_V | 1.118 | 0.96 | |
| 65_L | 89_L | 1.114 | 0.96 | |
| 92_L | 100_Y | 1.088 | 0.96 | |
| 9_A | 13_A | 1.082 | 0.96 | |
| 12_C | 34_F | 1.074 | 0.95 | |
| 90_Y | 94_K | 1.071 | 0.95 | |
| 77_L | 122_F | 1.067 | 0.95 | |
| 92_L | 131_A | 1.058 | 0.95 | |
| 64_G | 68_P | 1.052 | 0.95 | |
| 82_K | 86_R | 1.042 | 0.94 | |
| 51_L | 90_Y | 1.026 | 0.94 | |
| 46_L | 50_E | 1.016 | 0.93 | |
| 81_E | 119_S | 1.016 | 0.93 | |
| 50_E | 57_T | 1.012 | 0.93 | |
| 106_E | 109_E | 1.007 | 0.93 | |
| 117_E | 120_H | 1.006 | 0.93 | |
| 16_A | 34_F | 1.004 | 0.93 | |
| 91_E | 107_A | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3d3bA | 1 | 1 | 100 | 0.046 | Contact Map | 0.788 |
| 3r2dA | 2 | 0.9928 | 100 | 0.07 | Contact Map | 0.849 |
| 1tzvA | 1 | 0.9856 | 100 | 0.081 | Contact Map | 0.845 |
| 1eyvA | 2 | 1 | 100 | 0.111 | Contact Map | 0.86 |
| 1sqgA | 1 | 0.964 | 100 | 0.215 | Contact Map | 0.83 |
| 1q8cA | 1 | 0.9281 | 100 | 0.219 | Contact Map | 0.51 |
| 2yxlA | 1 | 0.9856 | 100 | 0.256 | Contact Map | 0.662 |
| 1v54E | 2 | 0.5971 | 18.2 | 0.917 | Contact Map | 0.179 |
| 3hazA | 2 | 0.9928 | 10.4 | 0.926 | Contact Map | 0.193 |
| 3e2qA | 1 | 0.8561 | 10.3 | 0.926 | Contact Map | 0.099 |
Sequence Conservation (Image Generated using WebLogo v3)