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OPENSEQ.org

HPF - KDSC
UniProt: P0AFX0 - P0ABZ4
Length: 283
Sequences: 252
Seq/Len: 0.92
I_Prob: 0.02

HPF - Ribosome hibernation promoting factor
Paralog alert: 0.26 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HPF RAIA
KDSC - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: KDSC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_I 173_L 1.55 0.02
11_E 112_K 1.51 0.02
49_T 174_L 1.36 0.01
39_V 169_V 1.27 0.01
17_R 110_L 1.24 0.01
44_E 144_D 1.23 0.01
24_F 87_C 1.20 0.01
26_K 77_G 1.13 0.01
47_T 140_V 1.10 0.01
62_H 128_I 1.10 0.01
12_I 8_L 1.10 0.01
68_Q 169_V 1.09 0.01
50_S 123_V 1.09 0.01
65_A 31_L 1.07 0.01
3_L 155_Y 1.06 0.01
68_Q 91_G 1.03 0.01
78_I 109_L 1.02 0.01
11_E 93_T 1.01 0.01
30_Y 56_V 1.01 0.01
95_H 139_S 1.00 0.01
5_I 180_L 0.99 0.01
22_A 18_D 0.99 0.01
6_T 121_A 0.99 0.01
61_I 66_L 0.99 0.01
11_E 182_E 0.98 0.01
87_K 106_F 0.97 0.01
17_R 94_H 0.97 0.01
50_S 49_E 0.97 0.01
9_N 79_K 0.96 0.00
42_K 76_T 0.96 0.00
17_R 74_I 0.96 0.00
41_L 146_H 0.95 0.00
82_A 130_W 0.95 0.00
77_L 101_N 0.94 0.00
34_I 51_L 0.94 0.00
40_V 147_P 0.94 0.00
61_I 104_I 0.93 0.00
45_K 50_E 0.92 0.00
6_T 29_L 0.91 0.00
5_I 92_I 0.91 0.00
2_Q 99_Q 0.91 0.00
5_I 44_M 0.90 0.00
60_E 119_N 0.90 0.00
42_K 173_L 0.90 0.00
64_S 182_E 0.87 0.00
3_L 89_T 0.87 0.00
30_Y 130_W 0.86 0.00
38_Y 144_D 0.86 0.00
90_D 27_R 0.86 0.00
52_A 148_L 0.85 0.00
45_K 142_V 0.85 0.00
39_V 107_S 0.85 0.00
69_D 66_L 0.85 0.00
85_L 143_A 0.85 0.00
81_L 146_H 0.85 0.00
40_V 39_D 0.84 0.00
18_E 23_A 0.84 0.00
53_T 136_V 0.83 0.00
45_K 29_L 0.83 0.00
32_D 154_D 0.83 0.00
91_K 138_L 0.82 0.00
32_D 78_R 0.82 0.00
19_F 11_C 0.82 0.00
51_D 16_S 0.81 0.00
33_R 62_I 0.81 0.00
12_I 137_G 0.81 0.00
34_I 56_V 0.81 0.00
33_R 166_V 0.81 0.00
69_D 119_N 0.81 0.00
4_N 153_A 0.80 0.00
55_H 75_I 0.80 0.00
32_D 169_V 0.80 0.00
3_L 133_M 0.80 0.00
8_N 101_N 0.80 0.00
20_V 76_T 0.80 0.00
18_E 106_F 0.80 0.00
7_G 97_Q 0.79 0.00
55_H 36_V 0.79 0.00
6_T 85_D 0.79 0.00
2_Q 120_V 0.79 0.00
17_R 136_V 0.79 0.00
6_T 128_I 0.78 0.00
9_N 80_A 0.78 0.00
53_T 113_L 0.78 0.00
73_A 78_R 0.78 0.00
14_E 24_E 0.77 0.00
17_R 156_V 0.77 0.00
25_A 173_L 0.77 0.00
95_H 30_I 0.77 0.00
65_A 180_L 0.76 0.00
22_A 152_R 0.76 0.00
92_L 106_F 0.76 0.00
90_D 56_V 0.76 0.00
25_A 113_L 0.76 0.00
65_A 62_I 0.75 0.00
54_L 175_L 0.75 0.00
86_T 62_I 0.75 0.00
85_L 174_L 0.75 0.00
85_L 74_I 0.75 0.00
54_L 24_E 0.75 0.00
82_A 56_V 0.75 0.00
90_D 63_R 0.75 0.00
89_K 131_P 0.74 0.00
11_E 117_P 0.74 0.00
60_E 120_V 0.74 0.00
46_V 55_N 0.74 0.00
33_R 92_I 0.74 0.00
80_K 157_T 0.74 0.00
38_Y 37_L 0.74 0.00
19_F 37_L 0.74 0.00
45_K 26_I 0.74 0.00
57_N 138_L 0.73 0.00
85_L 26_I 0.73 0.00
25_A 20_I 0.73 0.00
23_K 127_L 0.73 0.00
93_K 23_A 0.73 0.00
93_K 55_N 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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