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OPENSEQ.org

NUOE - NUON
UniProt: P0AFD1 - P0AFF0
Length: 651
Sequences: 539
Seq/Len: 0.95
I_Prob: 0.01

NUOE - NADH-quinone oxidoreductase subunit E
Paralog alert: 0.19 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NUOE
NUON - NADH-quinone oxidoreductase subunit N
Paralog alert: 0.84 [within 20: 0.59] - ratio of genomes with paralogs
Cluster includes: HYCC HYFB HYFD HYFF NUOL NUOM NUON
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
155_P 327_G 1.42 0.01
127_T 376_M 1.20 0.00
112_K 326_V 1.18 0.00
38_E 359_L 1.14 0.00
74_T 376_M 1.09 0.00
143_M 203_L 1.05 0.00
127_T 312_A 1.03 0.00
134_L 300_Y 1.00 0.00
112_K 297_L 0.98 0.00
121_T 266_S 0.98 0.00
51_P 331_A 0.96 0.00
15_S 415_V 0.95 0.00
132_C 163_S 0.94 0.00
96_V 71_G 0.94 0.00
15_S 189_L 0.93 0.00
87_H 383_L 0.93 0.00
147_E 173_G 0.92 0.00
78_Q 287_M 0.92 0.00
79_I 68_R 0.91 0.00
107_A 344_V 0.91 0.00
126_F 261_A 0.90 0.00
135_G 153_L 0.89 0.00
55_I 346_L 0.88 0.00
156_E 69_V 0.87 0.00
63_G 431_S 0.87 0.00
63_G 276_I 0.86 0.00
134_L 228_P 0.86 0.00
103_Q 257_L 0.86 0.00
74_T 431_S 0.85 0.00
65_P 252_G 0.84 0.00
72_V 382_S 0.84 0.00
104_G 297_L 0.83 0.00
39_A 428_V 0.83 0.00
69_V 203_L 0.83 0.00
162_L 196_G 0.83 0.00
115_I 98_Y 0.82 0.00
122_F 205_A 0.82 0.00
45_K 311_V 0.82 0.00
82_Q 276_I 0.81 0.00
145_I 422_L 0.81 0.00
50_V 97_G 0.81 0.00
146_D 176_L 0.81 0.00
78_Q 152_S 0.81 0.00
89_I 192_N 0.81 0.00
50_V 353_G 0.81 0.00
81_R 393_I 0.80 0.00
135_G 425_Y 0.80 0.00
20_E 195_D 0.80 0.00
68_D 110_L 0.79 0.00
122_F 431_S 0.79 0.00
87_H 125_L 0.78 0.00
68_D 156_S 0.78 0.00
26_M 188_A 0.77 0.00
26_M 276_I 0.77 0.00
147_E 414_V 0.77 0.00
147_E 125_L 0.77 0.00
143_M 89_T 0.77 0.00
72_V 165_A 0.76 0.00
78_Q 80_V 0.76 0.00
93_D 138_P 0.76 0.00
119_Q 78_G 0.76 0.00
116_K 405_A 0.76 0.00
156_E 183_D 0.76 0.00
53_G 184_L 0.76 0.00
35_A 161_I 0.76 0.00
63_G 182_G 0.75 0.00
122_F 312_A 0.75 0.00
43_V 210_M 0.75 0.00
161_L 313_L 0.75 0.00
118_G 97_G 0.75 0.00
43_V 272_V 0.75 0.00
102_Y 172_F 0.74 0.00
131_T 272_V 0.74 0.00
118_G 340_A 0.74 0.00
161_L 69_V 0.74 0.00
96_V 209_L 0.74 0.00
63_G 465_L 0.74 0.00
109_L 176_L 0.74 0.00
89_I 154_E 0.74 0.00
51_P 374_A 0.74 0.00
161_L 401_V 0.74 0.00
111_K 148_R 0.73 0.00
21_A 288_A 0.73 0.00
74_T 221_V 0.72 0.00
161_L 261_A 0.72 0.00
162_L 89_T 0.72 0.00
146_D 383_L 0.72 0.00
89_I 262_P 0.72 0.00
58_I 464_V 0.72 0.00
50_V 255_M 0.71 0.00
165_Y 323_M 0.71 0.00
91_Y 65_P 0.71 0.00
38_E 163_S 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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