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OPENSEQ.org

MAP1 - SECY
UniProt: P0AE18 - P0AGA2
Length: 707
Sequences: 611
Seq/Len: 0.91
I_Prob: 0.00

MAP1 - Methionine aminopeptidase
Paralog alert: 0.96 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: AMPP MAP1 PEPQ YPDF
SECY - Protein translocase subunit SecY
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: SECY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
162_F 30_L 1.28 0.00
130_Q 98_V 1.19 0.00
162_F 406_L 1.15 0.00
11_I 115_K 1.15 0.00
176_G 82_I 1.13 0.00
132_S 229_A 1.12 0.00
168_Y 231_T 1.11 0.00
40_E 65_N 1.10 0.00
24_V 235_V 1.09 0.00
246_E 22_R 1.08 0.00
6_K 174_L 1.07 0.00
183_V 294_F 1.07 0.00
240_V 224_A 1.06 0.00
218_K 369_V 1.06 0.00
159_A 383_F 1.06 0.00
200_T 232_F 1.03 0.00
183_V 243_R 1.01 0.00
67_K 20_K 1.00 0.00
58_A 370_M 0.98 0.00
197_P 230_V 0.98 0.00
68_S 262_S 0.97 0.00
25_L 139_L 0.95 0.00
231_S 82_I 0.94 0.00
7_T 28_G 0.93 0.00
140_V 330_F 0.93 0.00
173_I 401_F 0.93 0.00
245_C 96_T 0.92 0.00
45_C 343_A 0.92 0.00
192_N 351_A 0.91 0.00
249_T 234_V 0.91 0.00
216_T 231_T 0.91 0.00
215_R 177_Q 0.91 0.00
162_F 277_A 0.90 0.00
127_R 424_M 0.90 0.00
131_E 129_I 0.89 0.00
177_F 289_T 0.89 0.00
155_K 390_F 0.88 0.00
202_T 119_Y 0.88 0.00
7_T 30_L 0.88 0.00
162_F 226_L 0.87 0.00
232_A 180_E 0.87 0.00
144_I 38_F 0.87 0.00
46_N 346_L 0.86 0.00
231_S 196_V 0.86 0.00
166_R 411_V 0.86 0.00
133_L 98_V 0.86 0.00
65_Y 363_A 0.85 0.00
127_R 158_F 0.85 0.00
123_E 39_I 0.85 0.00
47_D 88_A 0.85 0.00
238_I 102_L 0.85 0.00
236_H 194_G 0.85 0.00
183_V 130_F 0.85 0.00
90_D 223_V 0.84 0.00
89_K 45_D 0.84 0.00
47_D 290_I 0.84 0.00
144_I 39_I 0.84 0.00
223_V 132_S 0.83 0.00
183_V 28_G 0.83 0.00
117_K 158_F 0.83 0.00
223_V 321_Y 0.83 0.00
20_L 88_A 0.83 0.00
69_V 18_E 0.83 0.00
42_D 338_N 0.82 0.00
40_E 225_V 0.82 0.00
150_G 138_G 0.82 0.00
18_G 423_L 0.82 0.00
124_R 330_F 0.81 0.00
6_K 35_I 0.81 0.00
145_N 16_L 0.81 0.00
168_Y 95_L 0.81 0.00
18_G 127_L 0.80 0.00
96_I 353_V 0.80 0.00
238_I 19_L 0.80 0.00
201_F 20_K 0.80 0.00
136_A 384_I 0.80 0.00
20_L 190_I 0.79 0.00
218_K 379_L 0.79 0.00
112_M 126_V 0.79 0.00
94_V 384_I 0.79 0.00
118_P 35_I 0.79 0.00
127_R 326_I 0.79 0.00
246_E 102_L 0.79 0.00
127_R 47_A 0.79 0.00
105_F 126_V 0.78 0.00
56_V 290_I 0.78 0.00
177_F 405_S 0.78 0.00
188_S 384_I 0.78 0.00
200_T 228_F 0.78 0.00
173_I 282_S 0.77 0.00
36_V 409_V 0.77 0.00
18_G 68_S 0.77 0.00
109_T 226_L 0.77 0.00
225_T 331_F 0.77 0.00
83_D 305_T 0.77 0.00
177_F 164_L 0.77 0.00
229_S 232_F 0.76 0.00
167_E 290_I 0.76 0.00
223_V 16_L 0.76 0.00
11_I 291_A 0.76 0.00
211_K 390_F 0.76 0.00
188_S 424_M 0.76 0.00
240_V 326_I 0.76 0.00
151_A 222_L 0.76 0.00
159_A 221_L 0.75 0.00
60_L 414_M 0.75 0.00
184_L 23_L 0.75 0.00
55_A 306_I 0.75 0.00
231_S 434_K 0.75 0.00
136_A 286_F 0.75 0.00
27_M 25_F 0.75 0.00
65_Y 39_I 0.75 0.00
103_D 283_I 0.75 0.00
155_K 132_S 0.75 0.00
68_S 237_V 0.75 0.00
195_L 77_I 0.74 0.00
94_V 399_F 0.74 0.00
78_C 241_Q 0.74 0.00
211_K 253_Q 0.74 0.00
98_V 336_V 0.74 0.00
60_L 363_A 0.74 0.00
127_R 162_V 0.74 0.00
126_C 49_L 0.74 0.00
164_V 73_S 0.74 0.00
5_I 32_V 0.74 0.00
7_T 344_D 0.74 0.00
147_R 65_N 0.73 0.00
105_F 65_N 0.73 0.00
247_I 35_I 0.73 0.00
173_I 119_Y 0.73 0.00
29_E 337_F 0.73 0.00
173_I 405_S 0.73 0.00
105_F 264_H 0.73 0.00
34_P 333_T 0.72 0.00
44_I 234_V 0.72 0.00
189_R 222_L 0.72 0.00
223_V 99_H 0.72 0.00
213_E 307_S 0.72 0.00
150_G 21_R 0.72 0.00
215_R 132_S 0.72 0.00
3_I 49_L 0.72 0.00
220_G 275_I 0.72 0.00
11_I 336_V 0.72 0.00
122_G 99_H 0.72 0.00
216_T 130_F 0.72 0.00
96_I 333_T 0.72 0.00
60_L 178_I 0.71 0.00
77_V 401_F 0.71 0.00
231_S 96_T 0.71 0.00
122_G 378_A 0.71 0.00
24_V 243_R 0.71 0.00
107_G 71_A 0.71 0.00
220_G 283_I 0.71 0.00
238_I 410_V 0.71 0.00
130_Q 72_L 0.71 0.00
223_V 86_I 0.71 0.00
162_F 269_V 0.71 0.00
184_L 415_D 0.71 0.00
153_I 210_A 0.71 0.00
109_T 268_K 0.71 0.00
226_K 237_V 0.70 0.00
153_I 304_T 0.70 0.00
203_I 229_A 0.70 0.00
177_F 119_Y 0.70 0.00
110_S 270_N 0.70 0.00
39_G 314_Q 0.70 0.00
203_I 228_F 0.70 0.00
220_G 162_V 0.70 0.00
28_I 401_F 0.70 0.00
186_Y 330_F 0.70 0.00
65_Y 410_V 0.70 0.00
183_V 31_I 0.69 0.00
112_M 27_I 0.69 0.00
241_T 65_N 0.69 0.00
51_N 159_T 0.69 0.00
247_I 27_I 0.69 0.00
177_F 110_E 0.69 0.00
120_I 225_V 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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