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OPENSEQ.org

KDSC - PTHP
UniProt: P0ABZ4 - P0AA04
Length: 273
Sequences: 162
Seq/Len: 0.61
I_Prob: 0.01

KDSC - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: KDSC
PTHP - Phosphocarrier protein HPr
Paralog alert: 0.51 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PTHP PTSO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
70_I 29_F 1.68 0.01
63_R 14_L 1.42 0.01
138_L 21_Q 1.36 0.01
100_S 43_S 1.27 0.01
178_G 42_A 1.25 0.00
142_V 19_A 1.22 0.00
143_A 56_T 1.21 0.00
95_L 49_K 1.18 0.00
36_V 19_A 1.16 0.00
106_F 43_S 1.16 0.00
149_L 11_P 1.14 0.00
174_L 52_T 1.11 0.00
131_P 61_V 1.10 0.00
63_R 18_P 1.08 0.00
37_L 59_T 1.06 0.00
27_R 77_L 1.05 0.00
120_V 63_I 1.05 0.00
37_L 70_E 1.04 0.00
82_L 70_E 1.04 0.00
138_L 44_A 1.04 0.00
95_L 18_P 1.03 0.00
173_L 9_T 1.01 0.00
128_I 49_K 1.00 0.00
120_V 45_K 1.00 0.00
55_N 49_K 0.99 0.00
100_S 49_K 0.99 0.00
113_L 27_K 0.99 0.00
31_L 9_T 0.99 0.00
155_Y 49_K 0.97 0.00
81_K 29_F 0.97 0.00
26_I 70_E 0.96 0.00
101_N 21_Q 0.95 0.00
140_V 31_S 0.95 0.00
158_R 63_I 0.91 0.00
76_T 44_A 0.91 0.00
114_A 69_D 0.90 0.00
120_V 11_P 0.90 0.00
65_A 72_K 0.90 0.00
166_V 50_L 0.89 0.00
22_K 65_A 0.89 0.00
168_E 76_H 0.89 0.00
56_V 43_S 0.89 0.00
75_I 14_L 0.89 0.00
24_E 57_Q 0.88 0.00
173_L 27_K 0.88 0.00
133_M 25_E 0.87 0.00
133_M 27_K 0.87 0.00
75_I 70_E 0.87 0.00
69_D 18_P 0.87 0.00
63_R 48_F 0.86 0.00
136_V 26_A 0.85 0.00
37_L 31_S 0.85 0.00
56_V 70_E 0.85 0.00
18_D 79_K 0.85 0.00
29_L 50_L 0.84 0.00
70_I 33_I 0.84 0.00
60_Y 52_T 0.84 0.00
131_P 6_V 0.84 0.00
26_I 39_G 0.84 0.00
134_E 50_L 0.83 0.00
149_L 8_I 0.83 0.00
62_I 38_N 0.82 0.00
144_D 6_V 0.82 0.00
103_L 7_T 0.82 0.00
140_V 29_F 0.82 0.00
150_I 82_A 0.81 0.00
136_V 68_E 0.81 0.00
142_V 70_E 0.80 0.00
64_C 47_L 0.80 0.00
174_L 83_E 0.80 0.00
87_C 18_P 0.80 0.00
180_L 57_Q 0.80 0.00
181_D 79_K 0.80 0.00
106_F 23_V 0.79 0.00
108_D 8_I 0.79 0.00
43_Y 34_T 0.79 0.00
12_Y 55_L 0.79 0.00
26_I 21_Q 0.78 0.00
38_S 22_F 0.78 0.00
134_E 20_A 0.78 0.00
141_A 49_K 0.78 0.00
109_L 38_N 0.78 0.00
122_Y 19_A 0.78 0.00
31_L 72_K 0.78 0.00
139_S 2_F 0.78 0.00
143_A 52_T 0.78 0.00
17_A 63_I 0.77 0.00
95_L 33_I 0.77 0.00
109_L 64_S 0.77 0.00
85_D 42_A 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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