| UniProt: | P0AA04 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10788 | ||
| Length: | 85 (83) | ||
| Sequences: | 1795 | ||
| Seq/Len: | 21.63 |
| PTHP
Paralog alert: 0.51 [within 20: 0.01] - ratio of genomes with paralogs Cluster includes: PTHP PTSO |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 5_E | 60_V | 3.111 | 1.00 | |
| 65_A | 74_V | 2.593 | 1.00 | |
| 31_S | 69_D | 2.482 | 1.00 | |
| 30_T | 68_E | 2.329 | 1.00 | |
| 6_V | 78_V | 2.128 | 1.00 | |
| 4_Q | 78_V | 2.058 | 1.00 | |
| 22_F | 77_L | 2.005 | 1.00 | |
| 3_Q | 62_T | 1.971 | 1.00 | |
| 71_Q | 75_E | 1.951 | 1.00 | |
| 29_F | 76_H | 1.923 | 1.00 | |
| 25_E | 28_G | 1.907 | 1.00 | |
| 30_T | 69_D | 1.822 | 1.00 | |
| 3_Q | 64_S | 1.798 | 1.00 | |
| 78_V | 82_A | 1.779 | 1.00 | |
| 7_T | 60_V | 1.754 | 1.00 | |
| 25_E | 76_H | 1.719 | 1.00 | |
| 34_T | 41_S | 1.695 | 1.00 | |
| 37_S | 59_T | 1.695 | 1.00 | |
| 5_E | 62_T | 1.563 | 1.00 | |
| 29_F | 73_A | 1.539 | 1.00 | |
| 75_E | 79_K | 1.514 | 1.00 | |
| 36_T | 64_S | 1.466 | 1.00 | |
| 36_T | 41_S | 1.453 | 1.00 | |
| 41_S | 64_S | 1.412 | 1.00 | |
| 36_T | 62_T | 1.395 | 0.99 | |
| 2_F | 74_V | 1.376 | 0.99 | |
| 2_F | 71_Q | 1.349 | 0.99 | |
| 1_M | 70_E | 1.345 | 0.99 | |
| 22_F | 44_A | 1.34 | 0.99 | |
| 69_D | 72_K | 1.283 | 0.99 | |
| 79_K | 83_E | 1.269 | 0.99 | |
| 42_A | 53_L | 1.234 | 0.98 | |
| 72_K | 76_H | 1.227 | 0.98 | |
| 4_Q | 75_E | 1.208 | 0.98 | |
| 11_P | 57_Q | 1.189 | 0.98 | |
| 55_L | 61_V | 1.17 | 0.97 | |
| 32_E | 66_E | 1.119 | 0.96 | |
| 2_F | 70_E | 1.111 | 0.96 | |
| 33_I | 73_A | 1.095 | 0.96 | |
| 72_K | 75_E | 1.083 | 0.96 | |
| 22_F | 35_V | 1.08 | 0.95 | |
| 36_T | 39_G | 1.079 | 0.95 | |
| 9_T | 82_A | 1.036 | 0.94 | |
| 26_A | 77_L | 1.023 | 0.93 | |
| 42_A | 48_F | 1.021 | 0.93 | |
| 56_T | 59_T | 1.013 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3ccdA | 2 | 1 | 99.9 | 0.044 | Contact Map | 0.826 |
| 1ka5A | 1 | 1 | 99.9 | 0.06 | Contact Map | 0.821 |
| 1kklH | 3 | 1 | 99.9 | 0.061 | Contact Map | 0.845 |
| 3ihsA | 2 | 0.9647 | 99.9 | 0.065 | Contact Map | 0.829 |
| 1ptfA | 1 | 1 | 99.9 | 0.066 | Contact Map | 0.771 |
| 1sphA | 2 | 1 | 99.9 | 0.069 | Contact Map | 0.845 |
| 1y51A | 3 | 1 | 99.9 | 0.07 | Contact Map | 0.743 |
| 3le1A | 2 | 1 | 99.9 | 0.073 | Contact Map | 0.84 |
| 1pchA | 1 | 0.9882 | 99.9 | 0.095 | Contact Map | 0.777 |
| 2jpiA | 1 | 0.9059 | 41.7 | 0.871 | Contact Map | 0.139 |
Sequence Conservation (Image Generated using WebLogo v3)