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OPENSEQ.org

CYOC - CYOE
UniProt: P0ABJ3 - P0AEA5
Length: 500
Sequences: 571
Seq/Len: 1.22
I_Prob: 0.01

CYOC - Cytochrome o ubiquinol oxidase subunit 3
Paralog alert: 0.19 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: CYOC
CYOE - Protoheme IX farnesyltransferase
Paralog alert: 0.60 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: CYOE UBIA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
155_I 44_V 1.31 0.01
158_A 171_L 1.30 0.01
44_F 265_F 1.24 0.00
82_T 197_P 1.23 0.00
197_V 76_L 1.14 0.00
80_S 20_I 1.14 0.00
65_E 118_V 1.12 0.00
96_S 88_V 1.10 0.00
160_L 127_Y 1.09 0.00
77_L 184_R 1.06 0.00
148_L 16_F 1.06 0.00
98_V 76_L 1.06 0.00
29_F 223_L 1.04 0.00
96_S 281_V 1.02 0.00
181_S 62_R 1.01 0.00
93_N 242_V 1.00 0.00
96_S 157_E 0.99 0.00
109_G 139_G 0.99 0.00
105_T 165_L 0.99 0.00
35_S 23_I 0.99 0.00
96_S 118_V 0.98 0.00
105_T 197_P 0.97 0.00
140_F 69_E 0.97 0.00
102_L 95_I 0.96 0.00
192_I 76_L 0.96 0.00
125_V 217_A 0.96 0.00
140_F 217_A 0.95 0.00
75_L 215_A 0.95 0.00
104_L 219_A 0.93 0.00
137_S 159_D 0.93 0.00
137_S 271_A 0.92 0.00
151_T 171_L 0.91 0.00
114_G 96_A 0.91 0.00
197_V 116_G 0.89 0.00
96_S 40_I 0.89 0.00
107_L 86_S 0.87 0.00
64_F 83_P 0.87 0.00
200_L 193_I 0.86 0.00
107_L 190_A 0.86 0.00
178_M 271_A 0.86 0.00
103_A 107_P 0.85 0.00
160_L 160_S 0.85 0.00
137_S 206_K 0.85 0.00
41_S 88_V 0.85 0.00
35_S 51_A 0.85 0.00
104_L 235_V 0.84 0.00
30_W 220_T 0.84 0.00
29_F 125_S 0.84 0.00
161_M 36_Y 0.84 0.00
195_F 47_S 0.83 0.00
140_F 255_A 0.83 0.00
93_N 76_L 0.83 0.00
75_L 208_H 0.83 0.00
66_L 20_I 0.82 0.00
69_V 265_F 0.82 0.00
151_T 104_G 0.82 0.00
107_L 34_I 0.82 0.00
193_C 98_F 0.82 0.00
140_F 93_L 0.81 0.00
166_R 239_A 0.81 0.00
80_S 19_L 0.81 0.00
42_I 112_L 0.81 0.00
91_Y 252_Y 0.80 0.00
92_K 62_R 0.80 0.00
163_Q 175_P 0.80 0.00
98_V 159_D 0.80 0.00
71_V 246_G 0.80 0.00
74_F 90_A 0.79 0.00
71_V 81_I 0.79 0.00
114_G 285_V 0.79 0.00
54_T 171_L 0.79 0.00
151_T 19_L 0.79 0.00
140_F 235_V 0.79 0.00
74_F 221_L 0.79 0.00
111_G 82_S 0.79 0.00
55_A 227_G 0.78 0.00
161_M 72_K 0.78 0.00
64_F 260_W 0.78 0.00
25_K 145_A 0.78 0.00
162_V 100_L 0.78 0.00
114_G 87_L 0.78 0.00
166_R 235_V 0.78 0.00
106_W 232_K 0.77 0.00
103_A 159_D 0.77 0.00
155_I 239_A 0.76 0.00
98_V 126_L 0.76 0.00
183_F 151_Y 0.76 0.00
43_L 254_V 0.76 0.00
102_L 230_G 0.76 0.00
122_H 162_A 0.76 0.00
120_F 244_W 0.76 0.00
94_N 84_A 0.76 0.00
171_S 189_Q 0.76 0.00
54_T 154_V 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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