| UniProt: | P0ABJ3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10180 | ||
| Length: | 204 (182) | ||
| Sequences: | 2889 | ||
| Seq/Len: | 15.87 |
| CYOC
Paralog alert: 0.19 [within 20: 0.04] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 38_I | 41_S | 4.27 | 1.00 | |
| 98_V | 164_I | 3.062 | 1.00 | |
| 75_L | 111_G | 3.023 | 1.00 | |
| 175_T | 179_C | 2.781 | 1.00 | |
| 94_N | 97_Q | 2.726 | 1.00 | |
| 103_A | 161_M | 2.663 | 1.00 | |
| 82_T | 105_T | 2.616 | 1.00 | |
| 95_K | 99_I | 2.446 | 1.00 | |
| 82_T | 104_L | 2.409 | 1.00 | |
| 85_M | 101_W | 2.297 | 1.00 | |
| 142_L | 198_V | 2.121 | 1.00 | |
| 95_K | 167_R | 2.106 | 1.00 | |
| 74_F | 78_F | 2.026 | 1.00 | |
| 177_I | 181_S | 1.98 | 1.00 | |
| 46_T | 138_A | 1.916 | 1.00 | |
| 110_A | 114_G | 1.905 | 1.00 | |
| 39_L | 145_T | 1.9 | 1.00 | |
| 113_I | 151_T | 1.867 | 1.00 | |
| 99_I | 165_A | 1.852 | 1.00 | |
| 158_A | 162_V | 1.851 | 1.00 | |
| 50_L | 134_G | 1.807 | 1.00 | |
| 68_F | 118_Y | 1.793 | 1.00 | |
| 120_F | 143_V | 1.694 | 1.00 | |
| 78_F | 81_I | 1.688 | 1.00 | |
| 99_I | 164_I | 1.669 | 1.00 | |
| 90_M | 98_V | 1.654 | 1.00 | |
| 162_V | 166_R | 1.624 | 1.00 | |
| 114_G | 117_I | 1.553 | 1.00 | |
| 160_L | 180_L | 1.531 | 1.00 | |
| 99_I | 161_M | 1.516 | 1.00 | |
| 106_W | 154_L | 1.508 | 1.00 | |
| 110_A | 154_L | 1.483 | 1.00 | |
| 117_I | 121_H | 1.475 | 1.00 | |
| 142_L | 145_T | 1.473 | 1.00 | |
| 68_F | 115_M | 1.469 | 1.00 | |
| 106_W | 161_M | 1.467 | 1.00 | |
| 89_A | 97_Q | 1.462 | 1.00 | |
| 156_W | 180_L | 1.462 | 1.00 | |
| 70_L | 74_F | 1.453 | 1.00 | |
| 83_Y | 157_M | 1.451 | 1.00 | |
| 114_G | 118_Y | 1.449 | 1.00 | |
| 110_A | 151_T | 1.44 | 1.00 | |
| 48_A | 197_V | 1.436 | 1.00 | |
| 106_W | 158_A | 1.432 | 1.00 | |
| 118_Y | 122_H | 1.431 | 1.00 | |
| 100_S | 104_L | 1.428 | 1.00 | |
| 96_S | 100_S | 1.403 | 0.99 | |
| 185_H | 188_D | 1.379 | 0.99 | |
| 86_A | 164_I | 1.351 | 0.99 | |
| 142_L | 194_V | 1.343 | 0.99 | |
| 93_N | 171_S | 1.336 | 0.99 | |
| 113_I | 154_L | 1.331 | 0.99 | |
| 86_A | 102_L | 1.322 | 0.99 | |
| 148_L | 152_S | 1.287 | 0.99 | |
| 75_L | 115_M | 1.282 | 0.99 | |
| 96_S | 99_I | 1.264 | 0.99 | |
| 86_A | 98_V | 1.264 | 0.99 | |
| 99_I | 103_A | 1.258 | 0.99 | |
| 155_I | 159_V | 1.256 | 0.99 | |
| 89_A | 101_W | 1.244 | 0.98 | |
| 110_A | 158_A | 1.212 | 0.98 | |
| 157_M | 180_L | 1.186 | 0.98 | |
| 103_A | 165_A | 1.178 | 0.98 | |
| 29_F | 33_L | 1.166 | 0.97 | |
| 34_M | 38_I | 1.132 | 0.97 | |
| 27_F | 170_T | 1.119 | 0.96 | |
| 64_F | 126_N | 1.113 | 0.96 | |
| 151_T | 155_I | 1.089 | 0.96 | |
| 103_A | 107_L | 1.085 | 0.96 | |
| 95_K | 164_I | 1.064 | 0.95 | |
| 154_L | 158_A | 1.058 | 0.95 | |
| 91_Y | 178_M | 1.051 | 0.94 | |
| 36_D | 119_E | 1.05 | 0.94 | |
| 121_H | 125_V | 1.049 | 0.94 | |
| 161_M | 165_A | 1.042 | 0.94 | |
| 184_W | 191_W | 1.042 | 0.94 | |
| 90_M | 177_I | 1.04 | 0.94 | |
| 86_A | 177_I | 1.029 | 0.94 | |
| 107_L | 111_G | 1.026 | 0.94 | |
| 83_Y | 181_S | 1.018 | 0.93 | |
| 138_A | 142_L | 1.015 | 0.93 | |
| 86_A | 101_W | 1.015 | 0.93 | |
| 38_I | 42_I | 1.009 | 0.93 | |
| 113_I | 147_G | 1.007 | 0.93 | |
| 32_Y | 183_F | 1.003 | 0.93 | |
| 89_A | 94_N | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1fftC | 2 | 0.9951 | 100 | 0.114 | Contact Map | 0.294 |
| 1v54C | 2 | 0.9657 | 100 | 0.155 | Contact Map | 0.738 |
| 1m56C | 2 | 0.9608 | 100 | 0.155 | Contact Map | 0.69 |
| 1qleC | 1 | 0.9608 | 100 | 0.158 | Contact Map | 0.681 |
| 2yevA | 2 | 0.9608 | 100 | 0.159 | Contact Map | 0.664 |
| 3mk7C | 4 | 0.3137 | 4.3 | 0.96 | Contact Map | 0.264 |
| 3rfrC | 3 | 0.5931 | 3.2 | 0.962 | Contact Map | 0.271 |
| 1xioA | 1 | 0.8333 | 2.7 | 0.963 | Contact Map | 0.269 |
| 2jafA | 1 | 0.9265 | 2.1 | 0.966 | Contact Map | 0.198 |
| 3ddlA | 2 | 0.75 | 1.5 | 0.968 | Contact Map | 0.219 |
Sequence Conservation (Image Generated using WebLogo v3)