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OPENSEQ.org

YCED - YCEF
UniProt: P0AB28 - P0A729
Length: 367
Sequences: 276
Seq/Len: 0.76
I_Prob: 0.00

YCED - Uncharacterized protein YceD
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YCED
YCEF - Maf-like protein YceF
Paralog alert: 0.45 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YCEF YHDE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
51_F 151_F 1.48 0.00
123_V 139_V 1.44 0.00
123_V 37_S 1.42 0.00
134_V 44_L 1.37 0.00
74_Q 24_F 1.34 0.00
118_D 7_A 1.31 0.00
51_F 161_F 1.26 0.00
43_S 103_Y 1.24 0.00
168_A 74_L 1.19 0.00
127_I 22_I 1.19 0.00
107_E 64_L 1.09 0.00
27_T 5_I 1.08 0.00
63_G 151_F 1.07 0.00
121_A 107_A 1.05 0.00
123_V 107_A 1.02 0.00
53_I 65_I 1.00 0.00
103_P 151_F 0.99 0.00
95_S 84_T 0.98 0.00
34_V 143_H 0.98 0.00
111_V 179_A 0.97 0.00
78_K 64_L 0.97 0.00
28_P 103_Y 0.97 0.00
7_P 151_F 0.96 0.00
33_R 178_I 0.96 0.00
160_K 55_S 0.96 0.00
10_L 181_C 0.95 0.00
44_D 127_F 0.94 0.00
128_I 135_I 0.94 0.00
67_V 44_L 0.94 0.00
166_V 25_E 0.93 0.00
117_I 141_K 0.93 0.00
71_L 179_A 0.92 0.00
96_D 121_E 0.91 0.00
107_E 121_E 0.91 0.00
40_S 49_A 0.91 0.00
156_E 4_L 0.91 0.00
125_D 134_E 0.91 0.00
14_R 151_F 0.90 0.00
96_D 105_G 0.90 0.00
6_L 151_F 0.90 0.00
112_N 41_P 0.90 0.00
101_A 14_R 0.89 0.00
161_P 104_T 0.89 0.00
14_R 95_A 0.89 0.00
51_F 44_L 0.89 0.00
63_G 123_F 0.88 0.00
33_R 150_S 0.88 0.00
123_V 27_A 0.88 0.00
135_P 57_A 0.87 0.00
156_E 5_I 0.87 0.00
28_P 90_L 0.87 0.00
166_V 105_G 0.87 0.00
156_E 36_R 0.86 0.00
31_V 109_F 0.86 0.00
84_V 7_A 0.85 0.00
104_E 159_T 0.85 0.00
131_L 22_I 0.85 0.00
138_D 181_C 0.84 0.00
102_L 151_F 0.84 0.00
91_S 151_F 0.84 0.00
123_V 58_S 0.83 0.00
86_T 191_P 0.83 0.00
11_D 20_L 0.83 0.00
13_V 170_N 0.82 0.00
84_V 36_R 0.82 0.00
41_V 103_Y 0.82 0.00
85_Y 37_S 0.81 0.00
32_E 60_Y 0.81 0.00
131_L 183_M 0.81 0.00
168_A 120_V 0.81 0.00
169_S 72_C 0.81 0.00
113_E 151_F 0.80 0.00
80_F 103_Y 0.80 0.00
81_T 21_Q 0.80 0.00
92_P 180_L 0.80 0.00
94_R 12_W 0.80 0.00
171_K 40_S 0.80 0.00
67_V 95_A 0.80 0.00
100_E 128_R 0.80 0.00
128_I 164_L 0.80 0.00
43_S 100_V 0.80 0.00
98_Q 54_Q 0.80 0.00
123_V 173_V 0.79 0.00
24_G 67_G 0.79 0.00
119_L 144_P 0.79 0.00
33_R 91_Q 0.78 0.00
12_P 180_L 0.78 0.00
63_G 78_I 0.78 0.00
134_V 23_S 0.78 0.00
136_V 65_I 0.78 0.00
66_K 22_I 0.78 0.00
11_D 152_K 0.78 0.00
168_A 56_L 0.78 0.00
94_R 25_E 0.77 0.00
23_Q 94_K 0.77 0.00
63_G 95_A 0.77 0.00
65_A 89_R 0.77 0.00
31_V 28_A 0.77 0.00
136_V 9_T 0.77 0.00
51_F 78_I 0.76 0.00
10_L 187_E 0.76 0.00
63_G 45_V 0.76 0.00
161_P 80_G 0.76 0.00
162_N 111_S 0.76 0.00
31_V 79_T 0.76 0.00
78_K 22_I 0.76 0.00
65_A 49_A 0.76 0.00
27_T 113_N 0.76 0.00
33_R 158_I 0.75 0.00
165_A 111_S 0.75 0.00
125_D 9_T 0.75 0.00
134_V 100_V 0.75 0.00
26_Y 134_E 0.75 0.00
21_D 72_C 0.75 0.00
106_Y 170_N 0.75 0.00
118_D 83_L 0.75 0.00
109_I 187_E 0.75 0.00
169_S 109_F 0.75 0.00
102_L 161_F 0.74 0.00
123_V 4_L 0.74 0.00
10_L 30_E 0.74 0.00
104_E 101_T 0.74 0.00
46_E 5_I 0.74 0.00
117_I 37_S 0.74 0.00
28_P 108_L 0.74 0.00
159_Q 119_E 0.74 0.00
69_V 125_V 0.74 0.00
78_K 98_N 0.74 0.00
66_K 133_A 0.74 0.00
80_F 5_I 0.73 0.00
53_I 159_T 0.73 0.00
2_Q 19_K 0.73 0.00
63_G 164_L 0.73 0.00
123_V 133_A 0.73 0.00
95_S 143_H 0.73 0.00
130_A 185_R 0.73 0.00
152_G 86_E 0.73 0.00
5_K 19_K 0.73 0.00
51_F 65_I 0.73 0.00
95_S 124_D 0.72 0.00
7_P 161_F 0.72 0.00
14_R 171_T 0.72 0.00
136_V 63_H 0.72 0.00
83_Q 40_S 0.72 0.00
97_E 182_Q 0.72 0.00
50_S 139_V 0.72 0.00
120_L 93_R 0.72 0.00
9_T 44_L 0.71 0.00
65_A 163_R 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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