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OPENSEQ.org

ISCA - TRML
UniProt: P0AAC8 - P0AGJ7
Length: 264
Sequences: 218
Seq/Len: 0.86
I_Prob: 0.00

ISCA - Iron-binding protein IscA
Paralog alert: 0.68 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ERPA ISCA SUFA
TRML - tRNA (cytidine(34)-2'-O)-methyltransferase
Paralog alert: 0.90 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: RLMB TRML
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_S 97_L 1.35 0.00
97_D 103_T 1.34 0.00
4_T 48_G 1.32 0.00
72_L 78_L 1.23 0.00
14_N 68_E 1.23 0.00
62_V 67_L 1.17 0.00
75_T 144_A 1.16 0.00
70_Q 135_N 1.16 0.00
28_L 117_E 1.15 0.00
50_P 141_V 1.12 0.00
97_D 55_T 1.12 0.00
107_V 125_V 1.10 0.00
6_S 4_I 1.07 0.00
61_K 122_I 1.07 0.00
6_S 140_V 1.05 0.00
13_V 26_G 1.05 0.00
98_E 112_D 1.05 0.00
79_F 76_F 1.02 0.00
14_N 58_T 1.01 0.00
41_V 101_P 1.01 0.00
89_K 69_A 1.01 0.00
30_V 56_A 1.00 0.00
3_I 97_L 1.00 0.00
105_F 122_I 1.00 0.00
72_L 104_R 0.99 0.00
26_L 78_L 0.99 0.00
17_L 64_R 0.99 0.00
64_V 4_I 0.98 0.00
3_I 17_N 0.97 0.00
88_F 50_D 0.97 0.00
7_D 91_Y 0.96 0.00
24_F 124_M 0.95 0.00
27_R 120_I 0.94 0.00
50_P 44_L 0.93 0.00
33_S 44_L 0.93 0.00
26_L 84_P 0.92 0.00
18_A 90_S 0.92 0.00
70_Q 78_L 0.92 0.00
11_A 69_A 0.92 0.00
80_V 30_H 0.91 0.00
106_H 112_D 0.91 0.00
89_K 30_H 0.90 0.00
88_F 46_R 0.89 0.00
6_S 97_L 0.88 0.00
16_F 24_N 0.88 0.00
58_K 93_D 0.88 0.00
28_L 17_N 0.87 0.00
17_L 86_H 0.86 0.00
58_K 98_M 0.86 0.00
98_E 52_H 0.86 0.00
28_L 141_V 0.86 0.00
17_L 111_L 0.85 0.00
15_T 60_H 0.85 0.00
47_E 44_L 0.85 0.00
11_A 121_R 0.84 0.00
106_H 135_N 0.84 0.00
5_L 104_R 0.84 0.00
75_T 44_L 0.83 0.00
80_V 59_R 0.83 0.00
25_G 21_L 0.83 0.00
45_V 54_F 0.82 0.00
15_T 55_T 0.81 0.00
59_G 144_A 0.81 0.00
16_F 124_M 0.80 0.00
45_V 124_M 0.79 0.00
7_D 140_V 0.79 0.00
79_F 48_G 0.79 0.00
19_N 17_N 0.78 0.00
41_V 70_E 0.78 0.00
33_S 56_A 0.77 0.00
95_V 57_V 0.77 0.00
51_E 88_A 0.77 0.00
89_K 98_M 0.77 0.00
64_V 32_I 0.76 0.00
16_F 47_A 0.76 0.00
62_V 52_H 0.76 0.00
33_S 58_T 0.76 0.00
4_T 85_A 0.76 0.00
30_V 64_R 0.76 0.00
54_V 8_E 0.75 0.00
81_K 111_L 0.75 0.00
79_F 86_H 0.75 0.00
53_I 69_A 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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