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OPENSEQ.org

PTSO - YADI
UniProt: P0A9N0 - P36881
Length: 236
Sequences: 307
Seq/Len: 1.40
I_Prob: 0.04

PTSO - Phosphocarrier protein NPr
Paralog alert: 0.51 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: PTHP PTSO
YADI - Putative phosphotransferase enzyme IIA component YadI
Paralog alert: 0.66 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: YADI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
72_E 5_V 1.41 0.04
12_K 71_P 1.39 0.04
20_A 19_A 1.36 0.04
20_A 22_K 1.31 0.03
6_T 29_Q 1.27 0.03
53_L 6_I 1.26 0.03
22_K 116_I 1.23 0.03
34_V 71_P 1.22 0.03
75_A 76_A 1.20 0.02
79_V 120_G 1.14 0.02
59_K 80_S 1.12 0.02
52_L 119_L 1.11 0.02
41_G 21_E 1.11 0.02
20_A 51_A 1.10 0.02
61_R 121_A 1.08 0.02
6_T 42_N 1.07 0.02
33_E 17_L 1.06 0.02
44_A 12_R 1.05 0.01
57_S 99_Q 1.03 0.01
76_L 32_A 1.03 0.01
20_A 84_S 1.03 0.01
22_K 56_D 1.02 0.01
19_P 99_Q 1.02 0.01
50_I 5_V 0.99 0.01
19_P 68_A 0.99 0.01
30_F 109_S 0.98 0.01
22_K 22_K 0.96 0.01
25_E 70_A 0.96 0.01
34_V 14_Q 0.96 0.01
71_Q 20_L 0.92 0.01
24_F 19_A 0.92 0.01
52_L 2_L 0.91 0.01
67_A 78_L 0.89 0.01
6_T 105_E 0.89 0.01
32_A 5_V 0.88 0.01
75_A 16_I 0.88 0.01
46_A 98_E 0.86 0.01
79_V 124_V 0.85 0.01
83_F 63_F 0.84 0.01
44_A 30_C 0.84 0.01
36_L 68_A 0.84 0.01
75_A 64_L 0.84 0.01
53_L 4_W 0.83 0.01
52_L 123_E 0.83 0.01
73_E 124_V 0.83 0.01
36_L 36_W 0.83 0.01
56_D 20_L 0.83 0.01
29_G 54_E 0.82 0.01
12_K 50_D 0.82 0.01
65_V 33_V 0.81 0.01
46_A 112_F 0.81 0.01
30_F 110_S 0.81 0.01
88_D 93_T 0.80 0.01
34_V 85_R 0.80 0.01
19_P 95_P 0.80 0.01
30_F 108_T 0.80 0.01
27_M 71_P 0.79 0.01
24_F 8_C 0.79 0.01
19_P 3_G 0.79 0.01
73_E 81_H 0.78 0.01
67_A 53_H 0.78 0.01
52_L 112_F 0.78 0.01
87_F 73_Y 0.77 0.01
21_M 104_R 0.77 0.01
40_E 14_Q 0.77 0.01
21_M 116_I 0.77 0.01
21_M 16_I 0.77 0.01
38_N 115_R 0.76 0.01
22_K 123_E 0.76 0.01
19_P 35_F 0.76 0.01
44_A 71_P 0.76 0.01
78_A 1_M 0.76 0.01
70_P 18_D 0.76 0.01
77_A 50_D 0.76 0.01
88_D 56_D 0.75 0.01
73_E 98_E 0.75 0.01
37_R 110_S 0.75 0.01
52_L 19_A 0.75 0.01
10_T 83_H 0.75 0.01
45_E 133_K 0.74 0.01
78_A 40_S 0.74 0.01
75_A 46_R 0.74 0.01
20_A 16_I 0.74 0.01
52_L 118_E 0.73 0.01
30_F 83_H 0.73 0.01
45_E 20_L 0.73 0.01
75_A 92_V 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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