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OPENSEQ.org

CLPS - CSPD
UniProt: P0A8Q6 - P0A968
Length: 180
Sequences: 140
Seq/Len: 0.80
I_Prob: 0.54

CLPS - ATP-dependent Clp protease adapter protein ClpS
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CLPS
CSPD - Cold shock-like protein CspD
Paralog alert: 0.78 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: CSPA CSPB CSPC CSPD CSPE CSPF CSPG CSPH CSPI
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
76_F 21_E 1.97 0.54
56_E 27_I 1.50 0.20
79_E 27_I 1.45 0.17
93_R 54_Q 1.43 0.17
41_E 20_P 1.27 0.10
78_A 27_I 1.27 0.10
33_V 33_T 1.22 0.08
82_E 11_N 1.22 0.08
92_A 23_G 1.12 0.06
61_L 65_V 1.11 0.06
22_L 41_T 1.06 0.05
102_T 27_I 1.06 0.05
79_E 65_V 1.06 0.05
67_Y 15_F 1.06 0.04
32_L 15_F 1.05 0.04
22_L 54_Q 1.03 0.04
56_E 51_D 1.01 0.04
54_D 66_P 1.00 0.04
76_F 27_I 1.00 0.04
67_Y 24_G 1.00 0.04
82_E 39_Y 0.96 0.03
28_Y 15_F 0.96 0.03
100_L 60_H 0.95 0.03
48_Q 5_T 0.93 0.03
26_S 22_G 0.93 0.03
75_V 49_Q 0.93 0.03
48_Q 64_I 0.93 0.03
79_E 40_R 0.92 0.03
37_Y 66_P 0.92 0.03
44_I 24_G 0.92 0.03
33_V 20_P 0.91 0.03
87_M 26_D 0.91 0.03
88_V 8_W 0.91 0.02
104_E 36_M 0.90 0.02
84_K 1_M 0.90 0.02
63_L 8_W 0.90 0.02
73_C 8_W 0.89 0.02
74_G 8_W 0.88 0.02
104_E 56_P 0.88 0.02
70_K 43_K 0.87 0.02
100_L 39_Y 0.87 0.02
46_V 49_Q 0.85 0.02
29_K 20_P 0.85 0.02
77_T 12_A 0.84 0.02
17_K 51_D 0.84 0.02
41_E 26_D 0.84 0.02
91_Y 27_I 0.84 0.02
67_Y 27_I 0.83 0.02
44_I 22_G 0.82 0.02
71_A 41_T 0.81 0.02
52_S 35_Q 0.81 0.02
40_M 8_W 0.81 0.02
49_K 35_Q 0.81 0.01
17_K 3_K 0.81 0.01
29_K 23_G 0.80 0.01
92_A 57_K 0.80 0.01
89_N 50_F 0.79 0.01
102_T 20_P 0.79 0.01
17_K 15_F 0.79 0.01
79_E 33_T 0.79 0.01
101_C 8_W 0.78 0.01
57_R 21_E 0.78 0.01
91_Y 46_Q 0.78 0.01
103_L 15_F 0.78 0.01
80_V 49_Q 0.77 0.01
24_P 56_P 0.77 0.01
100_L 11_N 0.77 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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