| UniProt: | P0A8Q6 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14241 | ||
| Length: | 106 (94) | ||
| Sequences: | 513 | ||
| Seq/Len: | 5.46 |
| CLPS
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 53_Y | 61_L | 3.371 | 1.00 | |
| 85_V | 103_L | 3.239 | 1.00 | |
| 53_Y | 57_R | 3.151 | 1.00 | |
| 61_L | 71_A | 2.864 | 1.00 | |
| 64_A | 68_Q | 2.388 | 1.00 | |
| 50_F | 91_Y | 2.288 | 1.00 | |
| 29_K | 72_I | 2.16 | 1.00 | |
| 39_P | 97_H | 2.125 | 1.00 | |
| 48_Q | 55_V | 2.018 | 1.00 | |
| 15_E | 20_D | 1.987 | 1.00 | |
| 33_V | 102_T | 1.965 | 1.00 | |
| 31_I | 70_K | 1.891 | 1.00 | |
| 79_E | 82_E | 1.886 | 1.00 | |
| 29_K | 106_A | 1.87 | 1.00 | |
| 64_A | 71_A | 1.858 | 1.00 | |
| 89_N | 100_L | 1.71 | 1.00 | |
| 32_L | 103_L | 1.622 | 0.99 | |
| 85_V | 102_T | 1.61 | 0.99 | |
| 54_D | 57_R | 1.479 | 0.99 | |
| 77_T | 80_V | 1.329 | 0.97 | |
| 23_K | 65_V | 1.328 | 0.97 | |
| 32_L | 78_A | 1.284 | 0.96 | |
| 88_V | 101_C | 1.284 | 0.96 | |
| 79_E | 83_T | 1.25 | 0.95 | |
| 45_D | 91_Y | 1.23 | 0.94 | |
| 91_Y | 95_N | 1.225 | 0.94 | |
| 50_F | 87_M | 1.225 | 0.94 | |
| 17_K | 72_I | 1.201 | 0.93 | |
| 26_S | 105_K | 1.143 | 0.91 | |
| 31_I | 72_I | 1.086 | 0.88 | |
| 40_M | 62_M | 1.078 | 0.87 | |
| 39_P | 100_L | 1.073 | 0.87 | |
| 86_A | 94_E | 1.069 | 0.87 | |
| 31_I | 71_A | 1.063 | 0.86 | |
| 33_V | 78_A | 1.047 | 0.85 | |
| 56_E | 73_C | 1.031 | 0.84 | |
| 91_Y | 96_E | 1.022 | 0.83 | |
| 32_L | 99_L | 1.012 | 0.82 | |
| 22_L | 94_E | 1.004 | 0.82 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2w9rA | 1 | 1 | 100 | 0.23 | Contact Map | 0.727 |
| 3dnjA | 2 | 0.8019 | 100 | 0.28 | Contact Map | 0.755 |
| 3o1fA | 1 | 0.7642 | 100 | 0.307 | Contact Map | 0.83 |
| 3tqqA | 1 | 0.5755 | 18.1 | 0.933 | Contact Map | 0.113 |
| 2blnA | 2 | 0.5566 | 13.6 | 0.937 | Contact Map | 0.109 |
| 3ewtE | 1 | 0.2264 | 12.6 | 0.938 | Contact Map | 0.813 |
| 1fmtA | 2 | 0.5849 | 11.9 | 0.939 | Contact Map | 0.125 |
| 2rm4A | 1 | 0.5283 | 10.3 | 0.94 | Contact Map | 0 |
| 4iqfA | 4 | 0.5943 | 8.6 | 0.942 | Contact Map | 0.135 |
| 2bw0A | 1 | 0.7642 | 8.5 | 0.942 | Contact Map | 0.098 |
Sequence Conservation (Image Generated using WebLogo v3)