May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

EX7S - ISPA
UniProt: P0A8G9 - P22939
Length: 379
Sequences: 609
Seq/Len: 1.62
I_Prob: 0.04

EX7S - Exodeoxyribonuclease 7 small subunit
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: EX7S
ISPA - Farnesyl diphosphate synthase
Paralog alert: 0.78 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ISPA ISPB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
60_V 91_D 1.34 0.04
39_F 71_A 1.32 0.04
36_L 240_G 1.08 0.02
59_R 297_R 1.03 0.02
33_E 228_V 0.99 0.01
29_D 91_D 0.97 0.01
61_Q 252_A 0.94 0.01
59_R 88_A 0.94 0.01
28_G 274_L 0.94 0.01
35_A 119_T 0.94 0.01
30_L 178_H 0.93 0.01
21_I 58_M 0.92 0.01
56_A 184_A 0.92 0.01
43_V 22_I 0.91 0.01
46_A 75_C 0.91 0.01
21_I 248_S 0.91 0.01
39_F 243_Q 0.90 0.01
33_E 71_A 0.90 0.01
39_F 111_I 0.88 0.01
22_V 32_V 0.87 0.01
59_R 239_Q 0.85 0.01
35_A 142_I 0.85 0.01
15_L 52_V 0.85 0.01
54_Q 142_I 0.85 0.01
35_A 76_I 0.84 0.01
63_L 76_I 0.84 0.01
36_L 184_A 0.84 0.01
15_L 88_A 0.83 0.01
60_V 149_S 0.81 0.01
41_R 78_A 0.81 0.01
36_L 232_T 0.81 0.01
46_A 101_C 0.81 0.01
26_E 91_D 0.81 0.01
46_A 178_H 0.80 0.01
8_P 55_T 0.80 0.01
16_S 267_I 0.79 0.01
68_E 58_M 0.79 0.01
39_F 6_Q 0.79 0.01
61_Q 290_L 0.78 0.01
33_E 292_D 0.78 0.01
13_K 2_D 0.77 0.01
60_V 266_L 0.77 0.01
61_Q 118_Q 0.77 0.01
55_Q 251_P 0.76 0.01
51_A 261_K 0.76 0.01
73_T 57_H 0.76 0.01
43_V 251_P 0.76 0.01
49_G 165_E 0.76 0.01
36_L 59_F 0.75 0.01
35_A 165_E 0.75 0.01
38_E 221_V 0.74 0.01
59_R 267_I 0.74 0.01
46_A 58_M 0.74 0.01
39_F 156_G 0.74 0.01
40_E 111_I 0.74 0.01
41_R 56_G 0.73 0.01
46_A 174_L 0.73 0.01
21_I 29_N 0.72 0.01
27_S 94_L 0.72 0.01
56_A 120_L 0.72 0.01
60_V 70_A 0.72 0.01
21_I 165_E 0.72 0.01
35_A 164_A 0.71 0.01
59_R 151_I 0.71 0.01
49_G 155_C 0.71 0.01
39_F 255_G 0.70 0.01
21_I 262_K 0.70 0.01
19_E 165_E 0.70 0.01
50_Q 250_Y 0.70 0.01
20_Q 172_D 0.69 0.01
52_K 108_A 0.69 0.01
39_F 49_P 0.69 0.01
62_I 189_A 0.69 0.01
14_A 116_A 0.69 0.01
35_A 184_A 0.69 0.01
52_K 71_A 0.68 0.01
38_E 238_R 0.68 0.01
11_F 86_L 0.68 0.01
55_Q 265_D 0.68 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.4728 seconds.