| UniProt: | P0A8G9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11098 | ||
| Length: | 80 (79) | ||
| Sequences: | 760 | ||
| Seq/Len: | 9.62 |
| EX7S
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 17_E | 41_R | 6.046 | 1.00 | |
| 24_R | 34_E | 2.566 | 1.00 | |
| 40_E | 59_R | 2.206 | 1.00 | |
| 31_P | 35_A | 2.104 | 1.00 | |
| 39_F | 64_L | 2.08 | 1.00 | |
| 40_E | 44_Q | 1.971 | 1.00 | |
| 14_A | 48_Q | 1.832 | 1.00 | |
| 51_A | 55_Q | 1.802 | 1.00 | |
| 37_N | 40_E | 1.578 | 1.00 | |
| 14_A | 49_G | 1.571 | 1.00 | |
| 36_L | 56_A | 1.537 | 1.00 | |
| 21_I | 38_E | 1.516 | 1.00 | |
| 34_E | 37_N | 1.444 | 1.00 | |
| 11_F | 15_L | 1.372 | 0.99 | |
| 22_V | 26_E | 1.297 | 0.99 | |
| 36_L | 58_Q | 1.261 | 0.99 | |
| 33_E | 52_K | 1.222 | 0.98 | |
| 62_I | 75_F | 1.196 | 0.98 | |
| 11_F | 56_A | 1.19 | 0.98 | |
| 30_L | 38_E | 1.188 | 0.98 | |
| 22_V | 46_A | 1.159 | 0.97 | |
| 10_S | 13_K | 1.153 | 0.97 | |
| 13_K | 16_S | 1.124 | 0.96 | |
| 57_E | 63_L | 1.112 | 0.96 | |
| 47_R | 51_A | 1.107 | 0.96 | |
| 2_P | 5_N | 1.098 | 0.96 | |
| 24_R | 38_E | 1.096 | 0.96 | |
| 22_V | 42_G | 1.091 | 0.95 | |
| 10_S | 51_A | 1.074 | 0.95 | |
| 14_A | 52_K | 1.052 | 0.94 | |
| 50_Q | 54_Q | 1.041 | 0.94 | |
| 15_L | 56_A | 1.035 | 0.93 | |
| 41_R | 60_V | 1.028 | 0.93 | |
| 61_Q | 65_S | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1vp7A | 6 | 0.95 | 99.7 | 0.15 | Contact Map | 0.536 |
| 2psqA | 2 | 0.3625 | 10.2 | 0.879 | Contact Map | 0.72 |
| 2w1iA | 2 | 0.3375 | 8.1 | 0.885 | Contact Map | 0.5 |
| 3ugcA | 1 | 0.3375 | 7.2 | 0.888 | Contact Map | 0.503 |
| 3lxpA | 1 | 0.3875 | 7 | 0.888 | Contact Map | 0.696 |
| 3mxzA | 1 | 0.6625 | 6.8 | 0.889 | Contact Map | 0.213 |
| 2f9yA | 1 | 0.925 | 6.3 | 0.89 | Contact Map | 0.11 |
| 2ozoA | 1 | 0.475 | 6.2 | 0.891 | Contact Map | 0.289 |
| 3plsA | 1 | 0.3875 | 5.8 | 0.892 | Contact Map | 0.285 |
| 2ymbA | 4 | 0.9625 | 5.8 | 0.893 | Contact Map | 0.58 |
Sequence Conservation (Image Generated using WebLogo v3)