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OPENSEQ.org

TOLB - TOLR
UniProt: P0A855 - P0ABV6
Length: 572
Sequences: 501
Seq/Len: 0.91
I_Prob: 0.05

TOLB - Protein TolB
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TOLB
TOLR - Protein TolR
Paralog alert: 0.79 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: EXBD TOLR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
160_K 46_D 1.62 0.05
239_V 49_D 1.51 0.04
287_R 127_L 1.33 0.02
154_E 46_D 1.30 0.02
219_F 49_D 1.26 0.02
77_P 98_R 1.25 0.02
81_G 67_E 1.25 0.02
116_Y 64_V 1.22 0.02
95_G 139_T 1.20 0.02
152_V 51_T 1.20 0.02
372_S 105_T 1.19 0.01
305_T 136_G 1.19 0.01
425_A 70_G 1.18 0.01
399_S 66_V 1.18 0.01
90_A 98_R 1.15 0.01
269_N 132_V 1.15 0.01
389_V 71_I 1.13 0.01
27_I 31_I 1.12 0.01
54_I 68_V 1.10 0.01
421_V 19_V 1.10 0.01
273_M 117_Y 1.09 0.01
180_Y 19_V 1.08 0.01
243_P 14_S 1.08 0.01
165_T 109_I 1.07 0.01
224_S 34_A 1.06 0.01
72_D 104_K 1.06 0.01
165_T 107_F 1.05 0.01
401_L 40_T 1.04 0.01
80_P 111_G 1.04 0.01
308_Q 120_I 1.04 0.01
282_Q 44_E 1.04 0.01
114_V 71_I 1.02 0.01
201_P 19_V 1.00 0.01
35_R 39_I 1.00 0.01
386_G 36_A 1.00 0.01
307_D 13_K 0.99 0.01
231_L 21_L 0.99 0.01
256_S 35_T 0.98 0.01
283_V 68_V 0.98 0.01
328_T 136_G 0.98 0.01
350_S 118_D 0.97 0.01
198_S 136_G 0.97 0.01
390_I 35_T 0.97 0.01
19_L 90_Q 0.96 0.01
323_A 76_V 0.96 0.01
218_T 71_I 0.96 0.01
27_I 120_I 0.95 0.01
277_S 140_Q 0.95 0.01
274_D 106_V 0.94 0.01
366_G 40_T 0.94 0.01
404_V 68_V 0.94 0.01
21_A 91_V 0.94 0.01
60_A 135_V 0.94 0.01
208_S 21_L 0.94 0.01
58_V 96_S 0.94 0.01
277_S 78_V 0.93 0.01
352_N 68_V 0.93 0.01
386_G 42_S 0.93 0.01
405_S 19_V 0.93 0.01
383_A 78_V 0.92 0.01
28_D 41_Q 0.92 0.01
401_L 68_V 0.92 0.01
266_G 130_A 0.92 0.01
357_H 35_T 0.92 0.01
420_Q 86_L 0.92 0.01
324_P 68_V 0.92 0.01
177_Q 68_V 0.92 0.01
259_A 46_D 0.92 0.01
20_H 113_K 0.92 0.01
253_P 117_Y 0.92 0.01
221_S 113_K 0.91 0.01
195_V 44_E 0.91 0.01
265_T 129_S 0.91 0.01
382_L 74_Y 0.91 0.01
372_S 127_L 0.91 0.01
315_Y 137_L 0.91 0.01
354_G 36_A 0.91 0.01
296_F 76_V 0.91 0.01
58_V 81_D 0.91 0.01
408_G 42_S 0.90 0.01
287_R 109_I 0.90 0.01
180_Y 21_L 0.90 0.01
358_I 66_V 0.90 0.01
402_N 19_V 0.89 0.01
238_Q 66_V 0.89 0.01
189_G 32_F 0.89 0.01
223_R 118_D 0.89 0.01
91_W 127_L 0.89 0.01
385_N 127_L 0.89 0.01
129_L 89_E 0.89 0.01
92_S 62_P 0.89 0.01
201_P 136_G 0.88 0.01
57_I 24_V 0.88 0.01
251_F 40_T 0.88 0.01
283_V 129_S 0.88 0.01
423_F 38_I 0.88 0.01
144_A 64_V 0.88 0.01
193_F 30_L 0.87 0.01
261_A 115_V 0.87 0.01
261_A 110_G 0.87 0.01
201_P 22_L 0.87 0.01
121_T 135_V 0.87 0.01
60_A 10_R 0.87 0.01
270_L 54_Q 0.86 0.01
222_G 135_V 0.86 0.01
289_N 25_L 0.86 0.01
108_P 61_N 0.86 0.01
109_D 109_I 0.85 0.01
349_V 19_V 0.85 0.01
331_G 120_I 0.85 0.01
216_Y 130_A 0.85 0.01
327_I 40_T 0.85 0.01
425_A 68_V 0.85 0.01
213_K 62_P 0.85 0.01
116_Y 53_S 0.84 0.01
193_F 118_D 0.84 0.01
92_S 100_K 0.84 0.01
170_V 72_G 0.84 0.01
302_L 12_L 0.84 0.01
307_D 66_V 0.84 0.01
132_N 128_H 0.84 0.01
291_T 22_L 0.84 0.01
97_D 16_I 0.84 0.01
282_Q 45_V 0.84 0.01
236_V 31_I 0.83 0.01
115_A 118_D 0.83 0.01
89_A 66_V 0.83 0.01
170_V 116_P 0.83 0.01
283_V 133_K 0.83 0.01
291_T 21_L 0.83 0.00
329_W 107_F 0.83 0.00
270_L 35_T 0.83 0.00
23_V 22_L 0.83 0.00
403_L 63_P 0.83 0.00
58_V 135_V 0.82 0.00
212_S 66_V 0.82 0.00
373_S 140_Q 0.82 0.00
148_A 109_I 0.82 0.00
369_Q 34_A 0.82 0.00
413_R 130_A 0.82 0.00
371_L 139_T 0.82 0.00
209_P 34_A 0.82 0.00
198_S 111_G 0.82 0.00
287_R 14_S 0.82 0.00
73_R 54_Q 0.81 0.00
285_D 67_E 0.81 0.00
86_V 46_D 0.81 0.00
402_N 95_V 0.81 0.00
130_A 71_I 0.81 0.00
269_N 14_S 0.81 0.00
197_R 66_V 0.81 0.00
188_D 32_F 0.81 0.00
269_N 44_E 0.81 0.00
234_G 118_D 0.81 0.00
257_K 113_K 0.81 0.00
293_P 115_V 0.81 0.00
185_S 19_V 0.81 0.00
258_L 97_S 0.81 0.00
303_A 110_G 0.81 0.00
224_S 65_I 0.81 0.00
39_V 45_V 0.81 0.00
168_A 72_G 0.81 0.00
236_V 133_K 0.81 0.00
185_S 91_V 0.81 0.00
88_P 112_A 0.81 0.00
190_Y 39_I 0.81 0.00
256_S 54_Q 0.80 0.00
361_Q 41_Q 0.80 0.00
257_K 134_S 0.80 0.00
164_R 34_A 0.80 0.00
207_W 121_I 0.80 0.00
403_L 113_K 0.80 0.00
239_V 69_S 0.80 0.00
211_G 136_G 0.80 0.00
80_P 45_V 0.80 0.00
96_I 70_G 0.80 0.00
71_L 89_E 0.80 0.00
226_L 133_K 0.80 0.00
389_V 31_I 0.80 0.00
85_E 118_D 0.80 0.00
114_V 133_K 0.80 0.00
292_E 19_V 0.80 0.00
308_Q 25_L 0.79 0.00
336_D 132_V 0.79 0.00
95_G 134_S 0.79 0.00
99_V 121_I 0.79 0.00
114_V 111_G 0.79 0.00
191_N 97_S 0.79 0.00
163_F 46_D 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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