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OPENSEQ.org

RUVA - YBGC
UniProt: P0A809 - P0A8Z3
Length: 337
Sequences: 273
Seq/Len: 0.82
I_Prob: 0.04

RUVA - Holliday junction ATP-dependent DNA helicase RuvA
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RUVA
YBGC - Acyl-CoA thioester hydrolase YbgC
Paralog alert: 0.65 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: FADM YBGC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
164_V 14_Y 1.65 0.04
91_S 114_V 1.55 0.03
180_M 12_V 1.50 0.03
91_S 58_V 1.42 0.02
176_E 66_Y 1.38 0.02
81_V 51_M 1.26 0.01
66_K 120_K 1.21 0.01
61_Y 51_M 1.17 0.01
62_G 70_A 1.17 0.01
102_V 111_V 1.15 0.01
28_V 78_I 1.14 0.01
176_E 72_L 1.14 0.01
52_V 35_A 1.12 0.01
46_I 107_A 1.12 0.01
140_F 96_I 1.10 0.01
156_T 128_I 1.09 0.01
24_V 11_R 1.05 0.01
33_T 87_G 1.05 0.01
128_M 24_Y 1.04 0.01
101_A 80_T 1.04 0.01
47_V 69_P 1.04 0.01
188_D 71_R 1.03 0.01
124_L 25_H 1.00 0.01
203_L 88_T 0.99 0.01
110_L 19_A 0.99 0.01
178_S 71_R 0.98 0.01
30_M 25_H 0.98 0.01
183_K 131_E 0.98 0.01
190_S 122_R 0.98 0.01
89_I 102_T 0.98 0.01
101_A 87_G 0.96 0.01
94_S 26_A 0.96 0.01
21_V 65_E 0.96 0.01
92_G 35_A 0.96 0.01
83_P 130_A 0.96 0.01
20_E 6_F 0.94 0.01
51_F 66_Y 0.94 0.01
101_A 25_H 0.94 0.01
193_T 27_S 0.93 0.01
76_I 58_V 0.93 0.01
200_R 114_V 0.92 0.01
95_A 106_E 0.91 0.01
187_P 120_K 0.90 0.01
164_V 22_V 0.90 0.01
53_V 41_R 0.89 0.01
127_E 19_A 0.89 0.00
129_K 64_V 0.89 0.00
179_R 10_V 0.88 0.00
43_Q 128_I 0.88 0.00
110_L 38_E 0.87 0.00
196_R 26_A 0.87 0.00
4_R 87_G 0.87 0.00
65_N 89_S 0.87 0.00
40_E 102_T 0.86 0.00
187_P 35_A 0.86 0.00
120_T 39_M 0.85 0.00
116_I 55_V 0.85 0.00
39_P 78_I 0.84 0.00
53_V 125_P 0.83 0.00
119_K 54_R 0.83 0.00
17_V 105_N 0.83 0.00
105_E 115_D 0.82 0.00
132_F 113_C 0.82 0.00
128_M 98_N 0.82 0.00
8_I 126_K 0.82 0.00
51_F 105_N 0.82 0.00
61_Y 120_K 0.81 0.00
19_I 67_Y 0.81 0.00
130_D 66_Y 0.81 0.00
39_P 109_V 0.80 0.00
168_V 132_F 0.80 0.00
42_G 23_V 0.80 0.00
23_G 34_R 0.80 0.00
83_P 22_V 0.80 0.00
177_A 22_V 0.80 0.00
61_Y 124_L 0.80 0.00
178_S 92_F 0.80 0.00
45_A 56_A 0.80 0.00
168_V 71_R 0.80 0.00
74_E 63_T 0.79 0.00
183_K 60_R 0.79 0.00
66_K 68_A 0.79 0.00
202_A 80_T 0.79 0.00
19_I 32_Y 0.79 0.00
127_E 31_F 0.79 0.00
47_V 98_N 0.78 0.00
194_L 16_D 0.78 0.00
71_L 123_A 0.78 0.00
192_E 105_N 0.78 0.00
75_L 11_R 0.78 0.00
134_G 35_A 0.78 0.00
158_D 130_A 0.78 0.00
187_P 68_A 0.78 0.00
154_P 74_D 0.78 0.00
137_G 105_N 0.78 0.00
130_D 30_A 0.77 0.00
127_E 41_R 0.77 0.00
131_R 113_C 0.77 0.00
101_A 26_A 0.77 0.00
15_P 123_A 0.76 0.00
64_N 120_K 0.76 0.00
195_I 109_V 0.76 0.00
196_R 98_N 0.76 0.00
33_T 26_A 0.76 0.00
151_P 115_D 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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