| UniProt: | P0A809 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10923 | ||
| Length: | 203 (200) | ||
| Sequences: | 1690 | ||
| Seq/Len: | 8.45 |
| RUVA
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 51_F | 58_Q | 3.863 | 1.00 | |
| 6_R | 44_E | 3.505 | 1.00 | |
| 5_L | 28_V | 3.073 | 1.00 | |
| 190_S | 193_T | 3.022 | 1.00 | |
| 50_H | 73_K | 2.95 | 1.00 | |
| 53_V | 58_Q | 2.777 | 1.00 | |
| 9_I | 45_A | 2.475 | 1.00 | |
| 93_M | 101_A | 2.401 | 1.00 | |
| 11_E | 66_K | 2.368 | 1.00 | |
| 5_L | 21_V | 2.367 | 1.00 | |
| 118_K | 122_E | 2.231 | 1.00 | |
| 17_V | 30_M | 2.199 | 1.00 | |
| 6_R | 46_I | 2.161 | 1.00 | |
| 164_V | 181_V | 2.103 | 1.00 | |
| 163_A | 195_I | 2.062 | 1.00 | |
| 180_M | 202_A | 2.012 | 1.00 | |
| 107_V | 125_I | 1.942 | 1.00 | |
| 4_R | 46_I | 1.941 | 1.00 | |
| 85_L | 116_I | 1.937 | 1.00 | |
| 6_R | 20_E | 1.88 | 1.00 | |
| 106_E | 109_A | 1.86 | 1.00 | |
| 50_H | 76_I | 1.841 | 1.00 | |
| 3_G | 18_L | 1.79 | 1.00 | |
| 165_A | 169_A | 1.78 | 1.00 | |
| 123_R | 127_E | 1.776 | 1.00 | |
| 5_L | 19_I | 1.718 | 1.00 | |
| 40_E | 43_Q | 1.716 | 1.00 | |
| 30_M | 35_F | 1.711 | 1.00 | |
| 105_E | 129_K | 1.652 | 1.00 | |
| 163_A | 194_L | 1.633 | 1.00 | |
| 4_R | 10_I | 1.633 | 1.00 | |
| 5_L | 24_V | 1.629 | 1.00 | |
| 105_E | 122_E | 1.599 | 1.00 | |
| 74_E | 132_F | 1.59 | 1.00 | |
| 19_I | 28_V | 1.581 | 1.00 | |
| 31_P | 34_C | 1.56 | 1.00 | |
| 89_I | 113_L | 1.558 | 1.00 | |
| 16_L | 27_E | 1.547 | 1.00 | |
| 28_V | 49_T | 1.526 | 1.00 | |
| 34_C | 47_V | 1.522 | 1.00 | |
| 107_V | 122_E | 1.52 | 1.00 | |
| 8_I | 44_E | 1.497 | 1.00 | |
| 30_M | 34_C | 1.496 | 1.00 | |
| 69_R | 73_K | 1.469 | 0.99 | |
| 31_P | 68_E | 1.448 | 0.99 | |
| 3_G | 69_R | 1.434 | 0.99 | |
| 20_E | 46_I | 1.404 | 0.99 | |
| 19_I | 45_A | 1.399 | 0.99 | |
| 81_V | 124_L | 1.399 | 0.99 | |
| 103_E | 130_D | 1.382 | 0.99 | |
| 111_V | 118_K | 1.372 | 0.99 | |
| 94_S | 97_Q | 1.369 | 0.99 | |
| 98_F | 102_V | 1.35 | 0.99 | |
| 17_V | 47_V | 1.33 | 0.99 | |
| 52_V | 59_L | 1.312 | 0.99 | |
| 100_N | 104_R | 1.311 | 0.99 | |
| 173_K | 176_E | 1.292 | 0.98 | |
| 183_K | 201_A | 1.283 | 0.98 | |
| 116_I | 120_T | 1.279 | 0.98 | |
| 88_A | 113_L | 1.279 | 0.98 | |
| 48_F | 66_K | 1.273 | 0.98 | |
| 174_P | 178_S | 1.27 | 0.98 | |
| 93_M | 109_A | 1.241 | 0.98 | |
| 17_V | 38_L | 1.239 | 0.98 | |
| 9_I | 19_I | 1.198 | 0.97 | |
| 108_G | 111_V | 1.198 | 0.97 | |
| 85_L | 120_T | 1.189 | 0.97 | |
| 13_Q | 16_L | 1.176 | 0.97 | |
| 81_V | 85_L | 1.163 | 0.96 | |
| 9_I | 39_P | 1.162 | 0.96 | |
| 10_I | 20_E | 1.161 | 0.96 | |
| 71_L | 132_F | 1.156 | 0.96 | |
| 168_V | 177_A | 1.156 | 0.96 | |
| 85_L | 88_A | 1.138 | 0.96 | |
| 53_V | 57_A | 1.13 | 0.95 | |
| 89_I | 98_F | 1.13 | 0.95 | |
| 30_M | 47_V | 1.126 | 0.95 | |
| 52_V | 57_A | 1.124 | 0.95 | |
| 18_L | 25_G | 1.119 | 0.95 | |
| 115_G | 123_R | 1.113 | 0.95 | |
| 20_E | 24_V | 1.113 | 0.95 | |
| 68_E | 95_A | 1.106 | 0.95 | |
| 93_M | 113_L | 1.101 | 0.95 | |
| 31_P | 91_S | 1.1 | 0.95 | |
| 164_V | 177_A | 1.05 | 0.93 | |
| 79_N | 85_L | 1.049 | 0.92 | |
| 81_V | 113_L | 1.049 | 0.92 | |
| 4_R | 20_E | 1.034 | 0.92 | |
| 88_A | 92_G | 1.034 | 0.92 | |
| 93_M | 98_F | 1.02 | 0.91 | |
| 85_L | 113_L | 1.018 | 0.91 | |
| 177_A | 184_I | 1.018 | 0.91 | |
| 2_I | 49_T | 1.009 | 0.90 | |
| 12_K | 35_F | 1.005 | 0.90 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2ztdA | 2 | 0.9409 | 100 | 0.238 | Contact Map | 0.802 |
| 1cukA | 1 | 0.9951 | 100 | 0.241 | Contact Map | 0.701 |
| 1ixrA | 2 | 0.931 | 100 | 0.242 | Contact Map | 0.822 |
| 3b0xA | 1 | 0.9064 | 99.8 | 0.675 | Contact Map | 0.294 |
| 4bxoA | 1 | 0.7192 | 99.4 | 0.753 | Contact Map | 0.357 |
| 2w9mA | 2 | 0.9163 | 99.4 | 0.757 | Contact Map | 0.252 |
| 2csbA | 2 | 0.8522 | 99.3 | 0.764 | Contact Map | 0.578 |
| 4gfjA | 1 | 0.9163 | 99.1 | 0.783 | Contact Map | 0.528 |
| 1kftA | 1 | 0.3842 | 98.4 | 0.834 | Contact Map | 0.604 |
| 1dgsA | 2 | 0.9113 | 98.3 | 0.835 | Contact Map | 0.402 |
Sequence Conservation (Image Generated using WebLogo v3)