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OPENSEQ.org

KTHY - PABC
UniProt: P0A720 - P28305
Length: 482
Sequences: 294
Seq/Len: 0.62
I_Prob: 0.00

KTHY - Thymidylate kinase
Paralog alert: 0.03 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: KTHY
PABC - Aminodeoxychorismate lyase
Paralog alert: 0.66 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ILVE PABC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
73_M 21_F 1.58 0.00
44_T 146_E 1.36 0.00
162_E 78_V 1.32 0.00
114_G 142_L 1.30 0.00
12_E 45_R 1.29 0.00
17_T 240_P 1.28 0.00
84_T 163_L 1.27 0.00
204_V 222_S 1.26 0.00
161_Q 163_L 1.22 0.00
116_D 12_L 1.15 0.00
141_V 200_I 1.13 0.00
120_L 60_W 1.09 0.00
45_Q 3_L 1.06 0.00
97_I 181_W 1.06 0.00
159_I 177_A 1.05 0.00
192_P 207_R 1.05 0.00
73_M 258_Y 1.04 0.00
75_Y 27_T 1.03 0.00
75_Y 164_V 1.00 0.00
113_R 91_G 1.00 0.00
74_F 3_L 0.99 0.00
1_M 187_V 0.98 0.00
81_L 113_Y 0.98 0.00
131_F 46_L 0.98 0.00
142_T 161_E 0.97 0.00
146_G 45_R 0.97 0.00
68_K 161_E 0.97 0.00
199_A 87_S 0.97 0.00
186_T 240_P 0.96 0.00
156_L 147_Q 0.96 0.00
187_I 171_V 0.95 0.00
28_E 213_S 0.94 0.00
23_V 181_W 0.94 0.00
120_L 25_C 0.94 0.00
139_L 55_I 0.94 0.00
97_I 119_E 0.93 0.00
101_H 113_Y 0.93 0.00
110_G 45_R 0.93 0.00
19_A 45_R 0.93 0.00
105_T 55_I 0.93 0.00
104_S 113_Y 0.93 0.00
146_G 147_Q 0.93 0.00
63_E 38_L 0.93 0.00
102_D 27_T 0.92 0.00
113_R 138_G 0.92 0.00
204_V 3_L 0.92 0.00
135_L 36_V 0.92 0.00
132_R 12_L 0.91 0.00
179_A 207_R 0.91 0.00
92_N 253_S 0.91 0.00
167_F 144_R 0.90 0.00
193_L 38_L 0.90 0.00
120_L 27_T 0.90 0.00
84_T 104_L 0.90 0.00
143_P 113_Y 0.90 0.00
104_S 173_E 0.90 0.00
81_L 177_A 0.90 0.00
175_L 55_I 0.89 0.00
199_A 48_D 0.89 0.00
162_E 52_R 0.89 0.00
162_E 244_V 0.88 0.00
163_S 174_C 0.88 0.00
111_G 89_G 0.88 0.00
44_T 141_H 0.88 0.00
187_I 44_Q 0.88 0.00
44_T 197_V 0.87 0.00
141_V 266_E 0.87 0.00
73_M 262_A 0.87 0.00
46_L 123_L 0.87 0.00
127_V 204_F 0.87 0.00
124_R 150_I 0.86 0.00
150_A 147_Q 0.86 0.00
81_L 150_I 0.86 0.00
150_A 90_R 0.86 0.00
92_N 40_S 0.86 0.00
46_L 196_G 0.85 0.00
202_T 32_I 0.85 0.00
124_R 27_T 0.85 0.00
110_G 243_P 0.85 0.00
116_D 229_A 0.85 0.00
116_D 166_D 0.85 0.00
138_Y 113_Y 0.85 0.00
103_L 27_T 0.85 0.00
105_T 252_F 0.85 0.00
3_S 219_V 0.84 0.00
120_L 242_M 0.84 0.00
103_L 30_R 0.84 0.00
28_E 249_D 0.84 0.00
47_A 173_E 0.84 0.00
46_L 147_Q 0.84 0.00
44_T 147_Q 0.84 0.00
167_F 196_G 0.84 0.00
179_A 265_C 0.83 0.00
167_F 91_G 0.83 0.00
17_T 81_V 0.83 0.00
167_F 138_G 0.83 0.00
167_F 136_L 0.83 0.00
159_I 113_Y 0.82 0.00
19_A 27_T 0.82 0.00
85_V 235_C 0.82 0.00
104_S 175_C 0.82 0.00
126_A 129_R 0.81 0.00
144_E 46_L 0.81 0.00
198_D 129_R 0.81 0.00
122_T 50_C 0.81 0.00
167_F 80_K 0.81 0.00
50_L 153_H 0.81 0.00
54_V 242_M 0.81 0.00
195_A 193_D 0.81 0.00
177_L 150_I 0.81 0.00
95_W 141_H 0.81 0.00
73_M 126_S 0.80 0.00
17_T 54_M 0.80 0.00
50_L 184_G 0.80 0.00
55_L 151_R 0.80 0.00
124_R 37_S 0.80 0.00
63_E 173_E 0.80 0.00
69_A 125_L 0.80 0.00
103_L 150_I 0.79 0.00
199_A 167_S 0.79 0.00
187_I 152_S 0.79 0.00
178_A 52_R 0.79 0.00
86_I 148_V 0.79 0.00
159_I 174_C 0.79 0.00
208_V 121_I 0.79 0.00
115_I 229_A 0.79 0.00
81_L 164_V 0.79 0.00
174_Y 244_V 0.79 0.00
191_Q 5_N 0.79 0.00
71_V 15_S 0.79 0.00
195_A 33_D 0.79 0.00
202_T 241_V 0.79 0.00
191_Q 201_M 0.78 0.00
80_Q 197_V 0.78 0.00
209_K 7_H 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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