| UniProt: | P0A720 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12302 | ||
| Length: | 213 (207) | ||
| Sequences: | 2194 | ||
| Seq/Len: | 10.60 |
| KTHY
Paralog alert: 0.03 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 191_Q | 199_A | 3.244 | 1.00 | |
| 26_T | 201_R | 3.236 | 1.00 | |
| 139_L | 189_A | 3.072 | 1.00 | |
| 111_G | 173_R | 2.615 | 1.00 | |
| 140_D | 171_R | 2.613 | 1.00 | |
| 22_V | 197_M | 2.519 | 1.00 | |
| 171_R | 175_L | 2.514 | 1.00 | |
| 191_Q | 195_A | 2.464 | 1.00 | |
| 24_V | 28_E | 2.367 | 1.00 | |
| 187_I | 196_V | 2.275 | 1.00 | |
| 38_T | 81_L | 2.243 | 1.00 | |
| 157_D | 160_E | 2.242 | 1.00 | |
| 36_V | 94_T | 2.217 | 1.00 | |
| 192_P | 195_A | 2.128 | 1.00 | |
| 145_V | 148_K | 2.119 | 1.00 | |
| 103_L | 183_S | 2.063 | 1.00 | |
| 80_Q | 84_T | 2.03 | 1.00 | |
| 140_D | 175_L | 1.93 | 1.00 | |
| 20_R | 97_I | 1.877 | 1.00 | |
| 34_D | 94_T | 1.845 | 1.00 | |
| 137_L | 187_I | 1.819 | 1.00 | |
| 175_L | 186_T | 1.817 | 1.00 | |
| 20_R | 37_F | 1.806 | 1.00 | |
| 19_A | 197_M | 1.755 | 1.00 | |
| 48_E | 77_A | 1.753 | 1.00 | |
| 24_V | 97_I | 1.746 | 1.00 | |
| 4_K | 95_W | 1.737 | 1.00 | |
| 113_R | 162_E | 1.729 | 1.00 | |
| 12_E | 146_G | 1.725 | 1.00 | |
| 142_T | 190_T | 1.721 | 1.00 | |
| 19_A | 22_V | 1.718 | 1.00 | |
| 19_A | 200_I | 1.702 | 1.00 | |
| 5_Y | 98_G | 1.68 | 1.00 | |
| 87_K | 91_A | 1.634 | 1.00 | |
| 14_A | 141_V | 1.628 | 1.00 | |
| 50_L | 73_M | 1.621 | 1.00 | |
| 141_V | 145_V | 1.616 | 1.00 | |
| 138_Y | 184_I | 1.559 | 1.00 | |
| 197_M | 201_R | 1.548 | 1.00 | |
| 137_L | 203_T | 1.536 | 1.00 | |
| 138_Y | 186_T | 1.53 | 1.00 | |
| 176_E | 180_Q | 1.508 | 1.00 | |
| 32_I | 95_W | 1.508 | 1.00 | |
| 22_V | 194_E | 1.492 | 1.00 | |
| 187_I | 203_T | 1.472 | 1.00 | |
| 83_E | 87_K | 1.452 | 1.00 | |
| 185_H | 203_T | 1.442 | 1.00 | |
| 26_T | 30_L | 1.419 | 1.00 | |
| 24_V | 37_F | 1.415 | 1.00 | |
| 23_V | 204_V | 1.408 | 1.00 | |
| 36_V | 89_A | 1.408 | 1.00 | |
| 146_G | 150_A | 1.382 | 0.99 | |
| 7_V | 103_L | 1.363 | 0.99 | |
| 66_T | 83_E | 1.357 | 0.99 | |
| 139_L | 200_I | 1.35 | 0.99 | |
| 138_Y | 178_A | 1.335 | 0.99 | |
| 75_Y | 124_R | 1.332 | 0.99 | |
| 103_L | 136_T | 1.313 | 0.99 | |
| 8_I | 23_V | 1.305 | 0.99 | |
| 32_I | 35_M | 1.29 | 0.99 | |
| 71_V | 75_Y | 1.29 | 0.99 | |
| 178_A | 186_T | 1.283 | 0.99 | |
| 11_L | 167_F | 1.274 | 0.99 | |
| 107_A | 111_G | 1.27 | 0.99 | |
| 197_M | 200_I | 1.249 | 0.99 | |
| 198_D | 202_T | 1.244 | 0.98 | |
| 165_D | 168_N | 1.24 | 0.98 | |
| 116_D | 120_L | 1.227 | 0.98 | |
| 47_A | 77_A | 1.225 | 0.98 | |
| 7_V | 183_S | 1.224 | 0.98 | |
| 25_E | 29_Q | 1.222 | 0.98 | |
| 143_P | 164_F | 1.22 | 0.98 | |
| 46_L | 65_I | 1.202 | 0.98 | |
| 38_T | 98_G | 1.198 | 0.98 | |
| 145_V | 190_T | 1.161 | 0.97 | |
| 7_V | 98_G | 1.141 | 0.97 | |
| 138_Y | 175_L | 1.132 | 0.97 | |
| 137_L | 200_I | 1.13 | 0.97 | |
| 22_V | 193_L | 1.126 | 0.97 | |
| 79_V | 83_E | 1.125 | 0.97 | |
| 128_L | 131_F | 1.124 | 0.97 | |
| 124_R | 127_V | 1.124 | 0.97 | |
| 21_N | 25_E | 1.119 | 0.96 | |
| 172_A | 176_E | 1.118 | 0.96 | |
| 176_E | 179_A | 1.117 | 0.96 | |
| 86_I | 96_V | 1.116 | 0.96 | |
| 199_A | 202_T | 1.108 | 0.96 | |
| 89_A | 94_T | 1.103 | 0.96 | |
| 30_L | 205_T | 1.096 | 0.96 | |
| 18_T | 193_L | 1.085 | 0.96 | |
| 28_E | 35_M | 1.084 | 0.96 | |
| 75_Y | 105_T | 1.082 | 0.96 | |
| 141_V | 189_A | 1.081 | 0.95 | |
| 135_L | 185_H | 1.078 | 0.95 | |
| 12_E | 167_F | 1.077 | 0.95 | |
| 138_Y | 171_R | 1.074 | 0.95 | |
| 185_H | 207_W | 1.073 | 0.95 | |
| 44_T | 47_A | 1.068 | 0.95 | |
| 33_R | 94_T | 1.048 | 0.94 | |
| 75_Y | 102_D | 1.044 | 0.94 | |
| 168_N | 172_A | 1.039 | 0.94 | |
| 177_L | 184_I | 1.034 | 0.94 | |
| 5_Y | 90_L | 1.031 | 0.94 | |
| 26_T | 198_D | 1.015 | 0.93 | |
| 122_T | 125_D | 1.015 | 0.93 | |
| 103_L | 184_I | 1.009 | 0.93 | |
| 77_A | 81_L | 1.009 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4edhA | 2 | 0.9812 | 100 | 0.35 | Contact Map | 0.762 |
| 3czpA | 2 | 0.8451 | 100 | 0.37 | Contact Map | 0.444 |
| 4tmkA | 1 | 1 | 100 | 0.393 | Contact Map | 0.745 |
| 2plrA | 2 | 0.9343 | 100 | 0.42 | Contact Map | 0.781 |
| 1p6xA | 2 | 0.9624 | 100 | 0.424 | Contact Map | 0.421 |
| 2yogA | 2 | 0.9202 | 100 | 0.426 | Contact Map | 0.797 |
| 4hlcA | 2 | 0.9531 | 100 | 0.437 | Contact Map | 0.81 |
| 1nn5A | 1 | 0.9343 | 100 | 0.437 | Contact Map | 0.724 |
| 1gtvA | 2 | 0.9343 | 100 | 0.44 | Contact Map | 0.511 |
| 2z0hA | 2 | 0.9202 | 100 | 0.453 | Contact Map | 0.82 |
Sequence Conservation (Image Generated using WebLogo v3)