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OPENSEQ.org

KTHY - YCFH
UniProt: P0A720 - P0AFQ7
Length: 478
Sequences: 537
Seq/Len: 1.17
I_Prob: 0.00

KTHY - Thymidylate kinase
Paralog alert: 0.03 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: KTHY
YCFH - Uncharacterized deoxyribonuclease YcfH
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TATD YCFH YJJV
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_G 142_L 1.25 0.00
172_A 31_A 1.19 0.00
139_L 50_M 1.19 0.00
12_E 29_A 1.15 0.00
74_F 42_T 1.09 0.00
196_V 10_L 1.02 0.00
150_A 101_Y 1.02 0.00
174_Y 163_T 1.01 0.00
167_F 202_V 0.99 0.00
179_A 129_V 0.99 0.00
75_Y 159_E 0.98 0.00
12_E 37_C 0.98 0.00
69_A 154_L 0.98 0.00
162_E 192_A 0.96 0.00
182_K 136_A 0.94 0.00
97_I 58_D 0.94 0.00
79_V 154_L 0.94 0.00
146_G 26_L 0.94 0.00
186_T 133_D 0.94 0.00
137_L 234_L 0.94 0.00
31_G 140_A 0.92 0.00
47_A 12_G 0.91 0.00
159_I 119_I 0.90 0.00
172_A 248_D 0.89 0.00
18_T 25_V 0.88 0.00
47_A 40_V 0.87 0.00
181_D 34_V 0.87 0.00
71_V 192_A 0.87 0.00
160_E 189_R 0.86 0.00
18_T 153_V 0.86 0.00
101_H 119_I 0.85 0.00
79_V 50_M 0.84 0.00
163_S 3_L 0.84 0.00
111_G 138_T 0.84 0.00
38_T 185_A 0.82 0.00
146_G 37_C 0.82 0.00
113_R 151_G 0.82 0.00
80_Q 13_L 0.82 0.00
200_I 187_Q 0.82 0.00
17_T 48_L 0.82 0.00
120_L 91_A 0.82 0.00
12_E 154_L 0.82 0.00
139_L 38_L 0.81 0.00
61_G 16_E 0.81 0.00
14_A 201_L 0.81 0.00
157_D 38_L 0.80 0.00
184_I 169_D 0.80 0.00
158_R 162_E 0.80 0.00
148_K 79_D 0.80 0.00
194_E 245_V 0.80 0.00
172_A 190_D 0.79 0.00
50_L 20_K 0.79 0.00
25_E 245_V 0.79 0.00
74_F 159_E 0.79 0.00
157_D 228_A 0.78 0.00
175_L 107_V 0.78 0.00
183_S 145_E 0.78 0.00
207_W 6_S 0.78 0.00
17_T 43_T 0.77 0.00
97_I 24_D 0.77 0.00
5_Y 89_V 0.77 0.00
166_F 151_G 0.77 0.00
19_A 235_K 0.77 0.00
45_Q 244_Q 0.76 0.00
66_T 41_A 0.76 0.00
80_Q 42_T 0.75 0.00
202_T 190_D 0.75 0.00
55_L 170_L 0.75 0.00
74_F 127_V 0.75 0.00
160_E 6_S 0.74 0.00
84_T 6_S 0.74 0.00
107_A 113_F 0.74 0.00
187_I 57_R 0.74 0.00
84_T 250_F 0.74 0.00
12_E 135_R 0.73 0.00
105_T 89_V 0.73 0.00
105_T 174_I 0.73 0.00
72_L 128_I 0.73 0.00
106_Q 15_Y 0.73 0.00
204_V 186_E 0.73 0.00
25_E 111_E 0.73 0.00
115_I 133_D 0.73 0.00
152_A 153_V 0.73 0.00
25_E 136_A 0.73 0.00
11_L 100_Y 0.73 0.00
137_L 210_A 0.73 0.00
167_F 159_E 0.72 0.00
159_I 53_L 0.72 0.00
74_F 131_T 0.72 0.00
90_L 173_Y 0.72 0.00
93_G 171_G 0.72 0.00
97_I 242_L 0.72 0.00
7_V 58_D 0.71 0.00
118_H 124_N 0.71 0.00
169_R 222_A 0.71 0.00
12_E 100_Y 0.71 0.00
95_W 158_T 0.70 0.00
171_R 167_L 0.70 0.00
197_M 60_V 0.70 0.00
54_V 64_C 0.70 0.00
200_I 160_D 0.70 0.00
23_V 141_I 0.70 0.00
148_K 100_Y 0.70 0.00
48_E 182_F 0.70 0.00
80_Q 123_L 0.70 0.00
142_T 106_K 0.69 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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