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OPENSEQ.org

IHFA - RL35
UniProt: P0A6X7 - P0A7Q1
Length: 164
Sequences: 163
Seq/Len: 1.02
I_Prob: 0.00

IHFA - Integration host factor subunit alpha
Paralog alert: 0.56 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: DBHA DBHB IHFA IHFB
RL35 - 50S ribosomal protein L35
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RL35
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_M 37_A 1.34 0.00
4_T 34_T 1.29 0.00
1_M 15_K 1.29 0.00
41_G 30_R 1.28 0.00
58_N 18_G 1.24 0.00
9_S 51_S 1.21 0.00
41_G 63_P 1.15 0.00
44_V 53_G 1.14 0.00
82_R 17_T 1.12 0.00
84_G 22_F 1.10 0.00
22_D 59_I 1.10 0.00
84_G 17_T 1.09 0.00
49_F 36_K 1.06 0.00
84_G 16_K 1.06 0.00
87_L 38_T 1.05 0.00
41_G 20_G 1.04 0.00
9_S 58_V 1.02 0.00
41_G 36_K 1.02 0.00
20_K 2_P 1.02 0.00
11_Y 4_I 0.98 0.00
2_A 7_V 0.97 0.00
29_L 4_I 0.96 0.00
15_K 64_Y 0.96 0.00
6_A 52_K 0.95 0.00
33_E 43_H 0.95 0.00
53_D 16_K 0.94 0.00
11_Y 8_R 0.92 0.00
78_V 61_C 0.92 0.00
14_D 37_A 0.91 0.00
16_L 17_T 0.91 0.00
15_K 56_G 0.90 0.00
40_N 58_V 0.90 0.00
7_E 22_F 0.89 0.00
88_K 8_R 0.88 0.00
1_M 18_G 0.88 0.00
8_M 19_K 0.87 0.00
39_E 48_A 0.86 0.00
84_G 7_V 0.85 0.00
26_L 46_P 0.85 0.00
57_K 34_T 0.85 0.00
69_E 35_K 0.84 0.00
17_G 39_K 0.84 0.00
74_T 52_K 0.83 0.00
70_D 47_K 0.83 0.00
61_P 32_I 0.83 0.00
43_Q 30_R 0.83 0.00
34_I 43_H 0.82 0.00
89_S 41_K 0.81 0.00
11_Y 7_V 0.81 0.00
70_D 8_R 0.81 0.00
43_Q 6_T 0.80 0.00
1_M 64_Y 0.79 0.00
5_K 18_G 0.79 0.00
40_N 49_M 0.79 0.00
74_T 11_A 0.78 0.00
82_R 49_M 0.78 0.00
15_K 29_L 0.78 0.00
59_Q 9_G 0.78 0.00
46_L 59_I 0.78 0.00
32_E 47_K 0.78 0.00
53_D 40_R 0.77 0.00
93_N 47_K 0.77 0.00
41_G 64_Y 0.76 0.00
4_T 33_L 0.76 0.00
14_D 52_K 0.76 0.00
83_P 30_R 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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