| UniProt: | P0A7Q1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11231 | ||
| Length: | 65 (65) | ||
| Sequences: | 1122 | ||
| Seq/Len: | 17.26 |
| RL35
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 8_R | 11_A | 3.958 | 1.00 | |
| 32_I | 35_K | 2.831 | 1.00 | |
| 26_H | 48_A | 2.222 | 1.00 | |
| 10_A | 14_F | 2.162 | 1.00 | |
| 29_L | 45_R | 1.935 | 1.00 | |
| 51_S | 54_D | 1.93 | 1.00 | |
| 54_D | 57_L | 1.855 | 1.00 | |
| 23_K | 49_M | 1.823 | 1.00 | |
| 16_K | 22_F | 1.814 | 1.00 | |
| 24_H | 50_V | 1.797 | 1.00 | |
| 52_K | 55_L | 1.659 | 1.00 | |
| 40_R | 44_L | 1.659 | 1.00 | |
| 7_V | 61_C | 1.652 | 1.00 | |
| 21_G | 49_M | 1.537 | 1.00 | |
| 50_V | 58_V | 1.465 | 1.00 | |
| 7_V | 10_A | 1.409 | 1.00 | |
| 38_T | 41_K | 1.398 | 0.99 | |
| 37_A | 40_R | 1.366 | 0.99 | |
| 32_I | 36_K | 1.337 | 0.99 | |
| 4_I | 63_P | 1.31 | 0.99 | |
| 28_N | 40_R | 1.281 | 0.99 | |
| 39_K | 43_H | 1.274 | 0.99 | |
| 23_K | 47_K | 1.252 | 0.99 | |
| 42_R | 45_R | 1.229 | 0.98 | |
| 24_H | 48_A | 1.227 | 0.98 | |
| 33_L | 41_K | 1.214 | 0.98 | |
| 22_F | 58_V | 1.176 | 0.98 | |
| 22_F | 59_I | 1.154 | 0.97 | |
| 62_L | 65_A | 1.122 | 0.97 | |
| 17_T | 21_G | 1.104 | 0.96 | |
| 38_T | 42_R | 1.099 | 0.96 | |
| 25_K | 29_L | 1.086 | 0.96 | |
| 10_A | 61_C | 1.077 | 0.95 | |
| 37_A | 41_K | 1.062 | 0.95 | |
| 54_D | 58_V | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kix3 | 1 | 1 | 99.9 | -0.026 | Contact Map | 0.905 |
| 3v2d8 | 1 | 1 | 99.9 | -0.026 | Contact Map | 0.793 |
| 2zjr3 | 1 | 1 | 99.9 | -0.025 | Contact Map | 0.057 |
| 3bbo5 | 1 | 1 | 99.8 | -0.01 | Contact Map | 0.348 |
| 3sp4A | 2 | 0.3385 | 3 | 0.902 | Contact Map | 0.634 |
| 3ivrA | 2 | 0.6308 | 2.8 | 0.904 | Contact Map | |
| 4lgcA | 1 | 0.5538 | 2.5 | 0.907 | Contact Map | |
| 3e7wA | 1 | 0.6308 | 2.4 | 0.907 | Contact Map | 0.843 |
| 3g7sA | 2 | 0.6154 | 2.3 | 0.908 | Contact Map | 0.216 |
| 3c5eA | 1 | 0.6308 | 2.1 | 0.91 | Contact Map | 0.927 |
Sequence Conservation (Image Generated using WebLogo v3)