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Coupling matrix for [H:0111] and [A:0113]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.5 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0.2 -0.1 -0.1 0.8 0.1 -0.3 0.2 -0.1 -0.2 0.8 -0.1 -0.1 -0.1
F -0.2 0 0 0 0.3 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 -0.1 0.3 0 0 0
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.1 -0.1 0 0 0.2 0 0 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0.2 0 0 0 -0.1 0 0 0 0 0 -0.1 -0.1 -0.1 0 0 0.5 -0.1 0 0 0
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0.1 -0.1 0 0 0
R 0 0 0 0 -0.1 0 0 0 0 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.2 0.4 0 0
H 0.7 0 0 0 0.5 0 0 -0.1 0 0 0.2 -0.2 -0.5 -0.4 -0.1 0.4 0.3 -0.1 0 -0.2
N 0.3 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.2 0.4 0.6 -0.1 0 0.1 -0.1 -0.1 -0.1
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0.3 0 0 0 -0.2 0 0 -0.1 0 0 0.6 0.1 0.6 -0.3 -0.1 -0.3 0.2 -0.1 0 -0.1
T -0.2 0 0 0 -0.1 0 0 0 0 0 -0.3 0.4 1 -0.1 0 -0.1 -0.3 0 0 0
G 0 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0.1 -0.1 -0.1 0 0.3 -0.3 0.9 0.1 0.1 -0.4 -0.1 -0.1 0.5
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0 0 0 0.3 0 0 0 0 0 -0.1 0 -0.1 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0111 0.5 0 -0.3 -0.3 -0.1 -0.3 -0.3 0 -0.3 -0.3 -0.2 0.1 0.5 0.9 -0.3 0.5 0.2 0.7 -0.3 -0.1
0113 0.5 -0.5 -0.5 -0.5 0.3 -0.5 -0.5 -0.1 -0.5 -0.5 0.7 0.5 0.8 0.8 -0.4 0.5 1.2 -0.2 -0.5 -0.2
Select residue pair below:
i_j Score Prob
0107_0111 1.788 0.95
0081_0111 0.891 0.32
0048_0111 0.820 0.26
0033_0111 0.733 0.20
0106_0111 0.731 0.20
0111_0220 0.695 0.18
0053_0111 0.688 0.17
0022_0111 0.687 0.17
Local Interactions:
i_j Score Prob
0111_0113 1.451 0.82
0110_0111 1.060 0.49
0111_0112 0.881 0.31
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
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