May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
3wbf Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [E:0110] and [H:0111]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.1 0 0 -0.1 0 0 -0.2 0 0 -0.1 -0.2 -0.1 0.5 0 0.4 0 0.3 0 -0.1
F -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 0
I -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0.4 0 -0.1 0 0
L -0.3 0 0 0 0 0 0 0 0 0 0 0.5 -0.2 0.1 0 0.2 0 -0.1 0 0
V -0.3 -0.1 0 0 0 0 0 0 0 0 0 -0.1 0.2 0.3 0 -0.1 0.1 0 0 0
M -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 0
W -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 0
Y -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 0
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0.5 0.4 0 -0.2 -0.1 -0.2 0 0
E -0.3 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0.1 -0.1 0.3 0.5 -0.1 0.4 0.3 0.1 -0.1 -0.1
K 0 -0.1 0 0 -0.1 0 0 0.4 0 0 -0.1 0.3 -0.2 -1 0 0.4 0.1 0.7 0 0.2
R 0.4 0.4 0 0 0 0 0 0 0 0 0 0 0.1 -0.4 0 -0.2 0 0.1 0 0
H -0.2 0.3 0 0 0 0 0 0 0 0 0 0 0.4 -0.2 0 -0.1 0 -0.2 0 0
N 0 0 0 0 -0.1 0 0 0 0 0 0 0 0.2 0.4 0 0 -0.1 -0.3 0 0
Q -0.6 -0.1 0 0 0.4 0 0 -0.1 0 0 0 -0.1 0.5 0.4 0 0.2 -0.1 0 0 0
S 0.4 -0.1 0 0 -0.1 0 0 0.3 0 0 0 -0.1 -0.1 -0.3 0 -0.3 0.3 0.2 0 0
T 0.2 0 0 0 0 0 0 0 0 0 0 0 -0.2 -0.2 0 0.1 -0.1 0.4 0 0
G 0.5 0 0 0 0 0 0 0 0 0 0 0 -0.3 -0.1 0 -0.2 -0.1 0.2 0 0
P 0.6 0 0 0 0 0 0 0 0 0 0 0 -0.3 0.5 0 -0.2 -0.1 -0.5 0 0
C -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0110 0.8 -0.5 -0.3 0 -0.1 -0.5 -0.5 -0.5 0.1 1 0.5 0.2 0 0.1 0.6 0.4 0.2 0 -0.2 -0.5
0111 0.5 0 -0.3 -0.3 -0.1 -0.3 -0.3 0 -0.3 -0.3 -0.2 0.1 0.5 0.9 -0.3 0.5 0.2 0.7 -0.3 -0.1
Select residue pair below:
i_j Score Prob
0107_0111 1.788 0.95
0081_0111 0.891 0.32
0048_0111 0.820 0.26
0033_0111 0.733 0.20
0106_0111 0.731 0.20
0111_0220 0.695 0.18
0053_0111 0.688 0.17
0022_0111 0.687 0.17
Local Interactions:
i_j Score Prob
0111_0113 1.451 0.82
0110_0111 1.060 0.49
0111_0112 0.881 0.31
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M D K L R ...
Page generated in 0.0245 seconds.