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Coupling matrix for [Q:0085] and [V:0122]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 -0.1 -0.4 0.7 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 -0.4 0 0.2 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0 -0.2 0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 0.1 0.2 0.4 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
V 0 0 0.6 -0.3 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 0.2 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0 0.4 -0.2 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0.4 0 0 0
E 0 0 0.4 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 0.6 -0.3 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
R 0 0 0.2 -0.2 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 -0.3 1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
N 0 0 0 0.1 0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4
Q 0 0 0.1 0.1 0.5 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0 -0.5 0.4 0.3 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
T 0 0.4 -0.2 -0.1 -0.3 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0 0 0.3 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 0.3 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0085 0.6 -0.1 -0.4 0.6 -0.2 -0.4 -0.4 -0.6 0.2 -0.2 0.2 -0.3 0.3 0.3 0.4 0.4 0 -0.1 -0.3 -0.6
0122 -0.4 -0.1 1.5 1.1 0.8 0.5 0.1 -0.4 -0.4 -0.4 -0.4 -0.2 -0.4 -0.4 -0.4 -0.4 -0.1 -0.4 0.1 -0.1
Select residue pair below:
i_j Score Prob
0122_0125 1.602 0.98
0122_0135 1.284 0.90
0109_0122 1.118 0.80
0122_0147 1.096 0.78
0085_0122 0.963 0.64
0073_0122 0.799 0.43
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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