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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0122 -0.4 -0.1 1.5 1.1 0.8 0.5 0.1 -0.4 -0.4 -0.4 -0.4 -0.2 -0.4 -0.4 -0.4 -0.4 -0.1 -0.4 0.1 -0.1
Select residue pair below:
i_j Score Prob
0122_0125 1.602 0.98
0122_0135 1.284 0.90
0109_0122 1.118 0.80
0122_0147 1.096 0.78
0085_0122 0.963 0.64
0073_0122 0.799 0.43
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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