OPENSEQ.org -1517592878- GREMLIN Submission

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Coupling matrix for [Q:0063] and [C:0088]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0.1	-0.1	0	0	-0.1
F	-0.2	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0.5	0.2	0	0	-0.2
I	0	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0.4	0.2	0	0	-0.2
L	-0.5	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	-0.2	0.8	0	0	0.3
V	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
M	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.2	0.5	0	0	-0.1
W	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0
Y	-0.4	0	1.6	0	-0.1	0	0	0	0	0	0	0	0	0	0	-0.4	-0.2	0	0	-0.3
D	0.1	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0.5
E	0.4	-0.1	-0.3	-0.1	-0.2	0	0	0.3	0	0	0	0	0	0	0	0.5	0.3	0	0	-0.4
K	0.9	0	-0.2	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0.5	-0.3	0	0	-0.2
R	1	-0.1	-0.3	-0.1	0.5	0	0	-0.1	0	0	0	0	0	0	0	-0.5	-0.1	-0.1	0	0.1
H	-0.2	-0.1	1.1	-0.1	-0.2	0	0	-0.1	0	0	0	0	0	0	0	-0.2	0.1	0	0	-0.1
N	0.3	0	-0.2	0	-0.1	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0.4
Q	0.5	-0.1	-0.4	-0.1	1.1	0	0	-0.1	0	0	0	0	0	0	0	0.1	-0.4	-0.1	0	-0.1
S	-0.6	0	-0.3	0.6	-0.2	0	0	-0.1	0	0	0	0	0	0	0	1.6	-0.4	0	0	0.1
T	0.2	-0.1	-0.3	-0.1	-0.2	0	0	-0.1	0	0	0	0	0	0	0	-0.1	0.3	0.2	0	0.7
G	-0.1	0.5	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	-0.3	0.3	0	0	-0.1
P	0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	-0.1
C	-0.2	0	0.5	0	0.2	0	0	0	0	0	0	0	0	0	0	-0.2	-0.1	0	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0063	-0.3	-0.2	0.1	0.1	-0.5	-0.3	-0.6	-0.1	0.1	0.2	0.4	0.4	0	0.3	0.1	0.6	0.5	-0.1	-0.4	-0.1
0088	1.6	-0.2	0.7	-0.1	0.7	-0.6	-0.6	-0.3	-0.6	-0.6	-0.6	-0.6	-0.6	-0.6	-0.6	2	1.3	-0.4	-0.6	1

Select residue pair below:

i_j	Score	Prob
0063_0104	1.465	0.96
0063_0110	0.974	0.65
0063_0132	0.949	0.62
0059_0063	0.934	0.60
0063_0088	0.852	0.50
0063_0067	0.813	0.45

Local Interactions:

i_j

Score

Prob

See all coupling residues
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