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OPENSEQ.org

Apobec Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0063 -0.3 -0.2 0.1 0.1 -0.5 -0.3 -0.6 -0.1 0.1 0.2 0.4 0.4 0 0.3 0.1 0.6 0.5 -0.1 -0.4 -0.1
Select residue pair below:
i_j Score Prob
0063_0104 1.465 0.96
0063_0110 0.974 0.65
0063_0132 0.949 0.62
0059_0063 0.934 0.60
0063_0088 0.852 0.50
0063_0067 0.813 0.45
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...

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