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Coupling matrix for [A:0042] and [C:0087]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.2 -0.1 0 -0.2 -0.1 -0.1 -0.2 0.1 -0.2 -0.1 1.1
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
I 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
L 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
V -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0.5 0 0 0 0.5
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
D 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1
S 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3
G 0.3 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0.2 0 0.4 0 -0.3
P -0.1 0 0 0 0 0 0 0.6 0 0 0 0 0.4 0 0 -0.1 0 0 0 0.3
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0042 0.5 -0.3 -0.3 -0.3 1.2 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 0 -0.2 0.4 0.4 1.6 0
0087 0.6 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.3 -0.2 0.1 -0.2 -0.1 0.1 -0.2 -0.2 0.4 0 0.1 -0.2 0.9
Select residue pair below:
i_j Score Prob
0073_0087 2.407 1.00
0043_0087 1.835 0.99
0042_0087 0.965 0.64
0087_0119 0.956 0.63
0041_0087 0.834 0.48
Local Interactions:
i_j Score Prob
See all coupling residues
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Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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