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OPENSEQ.org
Apobec Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0087 0.6 -0.2 -0.2 -0.2 -0.2 -0.2 -0.2 0.3 -0.2 0.1 -0.2 -0.1 0.1 -0.2 -0.2 0.4 0 0.1 -0.2 0.9
Select residue pair below:
i_j Score Prob
0073_0087 2.407 1.00
0043_0087 1.835 0.99
0042_0087 0.965 0.64
0087_0119 0.956 0.63
0041_0087 0.834 0.48
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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