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Coupling matrix for [H:0011] and [R:0013]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 -0.1 0.4 0 -0.1 0
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
I 0 0 0 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
L 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0 -0.1 0
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
M 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
D 0 0 0 0 0 0 0.3 0 0 0 0 0.3 0 0 0 0 0 0 -0.2 0
E 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
K 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0.5 0
R 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0 0 0 0 0 0.3 0 0 -0.1 0 0.4 0 0 0 0.3 -0.1 0 -0.1 0
N 0 -0.2 0.1 0.4 0 -0.1 -0.4 -0.1 0.4 0.5 -0.1 0.3 0.1 -0.2 0 0.1 0.2 0 0.2 -0.4
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
S 0 0 0 -0.1 0 0 -0.1 0 0 -0.1 0 -0.2 0 0 0 0.2 0 0 -0.2 0.7
T 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
G 0 0 0 0 0 0 -0.1 0 -0.1 -0.1 -0.1 -0.2 0 -0.1 0 -0.1 -0.1 0 1.3 -0.1
P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0011 -0.1 -0.4 -0.1 0.1 -0.4 -0.4 -0.4 -0.4 0.1 -0.4 0.1 -0.3 0.5 1.8 -0.4 0.4 -0.4 0.2 -0.4 -0.4
0013 -0.2 -0.3 0.1 -0.1 -0.3 -0.5 0 -0.3 0.1 0.1 0 0.7 -0.1 0.1 -0.3 0.3 0.1 -0.2 0.6 0
Select residue pair below:
i_j Score Prob
0011_0158 1.475 0.96
Local Interactions:
i_j Score Prob
0011_0012 1.858 0.99
0009_0011 1.617 0.98
0010_0011 1.106 0.79
0011_0013 0.998 0.68
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...
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