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Apobec Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0011 -0.1 -0.4 -0.1 0.1 -0.4 -0.4 -0.4 -0.4 0.1 -0.4 0.1 -0.3 0.5 1.8 -0.4 0.4 -0.4 0.2 -0.4 -0.4
Select residue pair below:
i_j Score Prob
0011_0158 1.475 0.96
Local Interactions:
i_j Score Prob
0011_0012 1.858 0.99
0009_0011 1.617 0.98
0010_0011 1.106 0.79
0011_0013 0.998 0.68
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: L G K E F ...

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