May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DHFR Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [E:0173] and [G:0175]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.1 0 0 -0.1 0 0 0 -0.6 0.2 -0.1 -0.1 -0.1 0 0.2 -0.1 -0.1 0.6 -0.1 -0.1
F -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0.3 0 0 0 -0.2 0 0
I -0.1 0 0 0.4 -0.1 0 0 0 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.4
L 0 0 0 0 0 0 0 0 -0.3 0.3 -0.1 -0.1 -0.1 0.4 0.3 -0.1 -0.1 -0.4 -0.1 0
V 0.3 0.3 0 0 -0.1 0 0 0 -0.6 0 -0.1 -0.2 -0.1 0.3 0.2 0.1 0.3 -0.2 0.2 -0.1
M 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0.2 0 0 0 -0.1 0 0
W 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0
Y -0.3 -0.1 0 -0.1 0.3 -0.1 0 -0.1 1.5 -0.4 0.2 -0.1 -0.1 0.1 -0.2 0.4 -0.1 -0.2 -0.3 -0.1
D -0.2 -0.3 -0.1 -0.2 0.1 -0.1 -0.1 -0.1 -0.4 0.2 -0.1 1.1 0.2 -0.2 -0.3 -0.1 0.3 0.5 0.3 -0.2
E -0.7 -0.4 -0.1 0.1 0 -0.1 -0.1 0.5 0.2 0.4 -0.4 0 0.8 0.3 -0.4 0 0.2 1 -0.2 -0.3
K 0.3 -0.1 0.2 -0.1 -0.1 -0.1 0 -0.1 -0.4 0.2 0.3 -0.3 0.2 -0.1 0.2 0 0.1 -0.4 0.6 -0.1
R 0.4 -0.1 0 0 -0.1 0 0 -0.1 0.2 -0.2 -0.1 0.1 -0.1 -0.2 -0.1 -0.1 -0.1 0.6 -0.1 -0.1
H -0.2 0 0 0 -0.1 0 0 0 0.5 -0.1 -0.1 -0.1 -0.1 -0.2 0.6 -0.1 -0.1 0.1 -0.1 0
N 0 -0.1 0 0 -0.1 0 0 0 0.4 0 0.1 0.2 -0.1 0.3 0.2 -0.2 0.1 -0.2 -0.2 -0.1
Q 0.6 -0.1 0 0 -0.1 0 0 0 -0.4 0.1 -0.1 -0.1 -0.1 0.3 0.1 0 -0.1 0 -0.1 0
S -0.1 -0.2 -0.1 0.2 -0.2 -0.2 -0.1 -0.1 0.1 -0.1 -0.3 -0.1 0.1 0.1 -0.3 0.1 0 0.4 0.8 0.5
T -0.2 0.8 0 -0.1 -0.1 0 0 0 0.1 -0.2 -0.1 -0.2 -0.1 0.1 0.2 -0.1 -0.1 -0.2 -0.1 -0.1
G 0 0.2 0 -0.1 0.3 0.4 0 -0.1 0.1 0.9 0.2 -0.1 -0.2 -0.5 -0.3 0.5 0.1 -0.4 -0.2 -0.1
P 0 -0.1 0 -0.1 -0.1 0 0 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 -0.3 0.2 0.2 0.1 0.1 -0.2 0.3
C -0.1 0 0 0 0 0 0 0 0.8 -0.1 0.4 -0.1 0 -0.3 -0.1 -0.1 -0.1 0.1 -0.1 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0173 0 -0.8 -0.4 -0.5 0.1 -0.9 -1.2 -0.6 1.3 1.9 0.6 -0.2 -0.5 0.3 0.2 0.6 0.1 0.4 -0.2 -0.4
0175 0.6 -0.5 -1.1 -0.7 -0.6 -0.9 -1.1 -0.9 1.6 0.7 0 -0.1 -0.4 0.9 0.6 0.2 -0.1 2.1 0.2 -0.4
Select residue pair below:
i_j Score Prob
0029_0173 1.012 0.90
0173_0176 0.531 0.29
0030_0173 0.507 0.26
Local Interactions:
i_j Score Prob
0173_0174 0.678 0.51
0173_0175 0.654 0.47
0171_0173 0.522 0.27
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...

Page generated in 0.019 seconds.