May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DHFR Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0145] and [D:0146]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.1 -0.2 0 -0.5 -0.1 -0.1 -0.2 1.4 0.1 -0.1 0.1 0.1 -0.1 0.7 -0.1 0.1 -0.3 -0.2 -0.1
F -0.3 0 0 -0.1 -0.1 0 0 0 -0.4 0.2 0 0.2 -0.1 -0.2 1.1 0.2 -0.1 -0.1 -0.1 0
I -0.1 0 0 -0.1 -0.1 0 0 0 0 0.3 0 0 0 0.1 -0.1 -0.1 0.1 0 -0.1 0
L 0.1 0 0 0.3 -0.1 0 0 0 -0.1 -0.1 0 0 0 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 0
V -0.1 0 0 -0.1 -0.1 0 0 0 0.9 0.2 0 0 0 -0.2 -0.1 -0.1 -0.1 0 -0.1 0
M -0.1 0 0 0 -0.1 0 0 0 0.5 -0.1 0 0 0 -0.1 0 -0.1 -0.1 0 -0.1 0
W 0 0 0 0 0 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0
Y 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0.8 0 0 0.2 0.2 0 0 -0.1 -0.9 -0.2 0 0 -0.1 -0.2 -0.1 -0.1 1.2 -0.1 -0.2 0
E 0.2 0 0 -0.1 0.3 0 0 0 -0.6 -0.1 0 0 0 0.3 -0.1 0.3 -0.1 -0.1 0.2 0
K -0.1 0 0.4 0 0.8 0 0 0 -1 -0.1 0 0 0 -0.1 -0.1 0.6 -0.1 -0.1 0.3 0
R 0.8 0 0 -0.1 0 0 0 0 -0.4 -0.1 0 0 0 -0.1 -0.1 0 0 0 -0.1 0
H -0.1 0 0 -0.1 0 0 0 0 0 -0.1 0 0 0.4 -0.1 0 0 0 0 -0.1 0
N 0.6 0 0 -0.1 -0.1 0 0 0 -0.5 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0.9 0
Q -0.1 0 0 0.7 -0.1 0 0 0 -0.4 -0.1 0 0 0 -0.1 0 0 0 0.3 -0.1 0
S 0.5 0 0 0.3 -0.1 0 0 0.3 0.2 -0.2 0 0 0 -0.2 -0.1 -0.1 -0.1 -0.1 0.2 0
T -0.4 0.3 0 -0.2 0.2 0 0 0.3 -0.4 -0.2 0 0 -0.1 0.1 -0.2 -0.2 -0.2 0.3 1 0
G -0.1 -0.2 -0.1 -0.4 -0.6 -0.1 -0.1 0 1.7 0.8 -0.1 -0.2 -0.3 1.3 -0.3 -0.1 -0.2 -0.2 -0.6 -0.1
P -0.2 0 0 0.4 0.6 0 0 0 -0.7 -0.2 0 0 -0.1 -0.1 0.3 -0.1 -0.1 0.4 -0.1 0
C -0.5 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 -0.1 1.2 -0.1 -0.1 -0.1 -0.1 0.4 -0.4 0.4 0.8 -0.2 -0.4 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0145 0.8 0 -0.3 -0.3 0.2 -0.4 -0.7 -0.4 0.2 0.1 0.5 -0.4 -0.3 0 0.2 0.4 0 1.1 -0.2 -0.6
0146 0.9 -0.7 -0.7 0.3 0.2 -0.9 -0.9 -0.4 2 0.6 -0.9 -0.7 -0.3 0.6 0.1 0.4 0.8 -0.3 0.7 -0.9
Select residue pair below:
i_j Score Prob
0016_0145 4.225 1.00
0024_0145 1.448 0.99
0012_0145 0.693 0.54
0145_0148 0.608 0.40
0025_0145 0.590 0.37
0073_0145 0.523 0.28
Local Interactions:
i_j Score Prob
0145_0146 0.851 0.76
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...

Page generated in 0.0152 seconds.