May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DHFR Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [W:0025] and [S:0145]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.5 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0.5 0.3 -0.2
F 0.7 0 0 -0.1 0.2 -0.1 0 0.4 -0.1 -0.1 -0.1 0 0 -0.1 0 -0.2 -0.1 0.2 -0.1 -0.2
I 0.5 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1
L 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1
V 0.5 -0.1 -0.1 -0.1 0.1 -0.1 0 -0.1 0 0 -0.1 0 0 -0.1 0 0.9 -0.1 0.2 -0.1 -0.4
M -0.1 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
W -0.6 0.1 0 0.1 -0.2 0.1 -0.3 -0.4 0.2 0.3 -0.2 -0.1 0 0.4 0.2 -0.7 0.3 0.1 0 0.7
Y 0.2 0 0 0 -0.1 0 0 0 0 -0.1 0.9 0 0 -0.1 0 -0.1 0 0 -0.1 -0.1
D -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
K 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0
R -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0
H -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0
N 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.1
S -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.4 0 -0.1 0 -0.1
T 0.3 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0.3 0 -0.1 0 -0.1
G -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.3 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 -0.2 0 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0025 0.1 0.6 0.1 -0.2 1.1 0.1 0.8 0.9 -0.5 -0.3 -0.4 -0.2 -0.3 -0.3 -0.3 -0.1 0.2 -0.5 -0.5 -0.2
0145 0.8 0 -0.3 -0.3 0.2 -0.4 -0.7 -0.4 0.2 0.1 0.5 -0.4 -0.3 0 0.2 0.4 0 1.1 -0.2 -0.6
Select residue pair below:
i_j Score Prob
0016_0145 4.225 1.00
0024_0145 1.448 0.99
0012_0145 0.693 0.54
0145_0148 0.608 0.40
0025_0145 0.590 0.37
0073_0145 0.523 0.28
Local Interactions:
i_j Score Prob
0145_0146 0.851 0.76
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...

Page generated in 0.0164 seconds.