May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

DHFR Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0023] and [P:0024]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0.4 0 0 0 0 -0.3 0
F 0 0 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0.2 0 -0.2 -0.7 0.2 -0.1 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 0 0 1.4 0
L 0.1 -0.1 0.7 1.1 -0.3 -0.1 -0.1 0.1 0.2 -0.1 -0.1 -0.1 -0.2 -0.2 -0.1 -0.4 -0.1 -0.1 0.5 -0.1
V 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.5 0
M -0.1 -0.1 -0.3 0.8 0.7 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1
W 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
Y 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
D 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
E 0 0 0 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
K 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
R 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
H 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
N 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 0.3 -0.3 -0.2 0 0 0 0 0 0 0 0.3 0 0 0 0 0 0.6 0
S 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
T 0.4 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0.4 0 0 -0.3 0
G 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
P 0 0 0 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0
C 0 0 0 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0023 -0.2 0 1 0.9 0.3 0.7 -0.5 -0.5 -0.5 -0.1 -0.5 -0.5 -0.5 -0.2 0.9 -0.5 0.2 -0.3 -0.1 -0.1
0024 0.5 -0.5 0.5 1.7 1.1 -0.2 -0.5 -0.2 -0.2 -0.5 -0.5 -0.5 -0.2 -0.2 -0.5 0.1 -0.5 -0.5 1.2 -0.5
Select residue pair below:
i_j Score Prob
0024_0145 1.448 0.99
0017_0024 0.978 0.88
0016_0024 0.718 0.58
0012_0024 0.655 0.47
Local Interactions:
i_j Score Prob
0024_0025 2.725 1.00
0023_0024 0.770 0.66
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...

Page generated in 0.1615 seconds.