May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
DHFR Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [S:0012] and [P:0024]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 0 0.5 -0.1 -0.3 -0.1 0 0 -0.1 0 0 0 -0.1 -0.1 0 0.5 0 0 0.3 0
F 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0
I 0 0 0 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
L 0 0 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.2 0
V 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
W 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.3 0
Y 0 0 0 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0
D 0.7 -0.1 -0.5 1.2 -0.3 0.4 -0.1 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.1 -0.1 0.1 -0.1 -0.1 -0.1 -0.1
E -0.1 0 0.2 0.1 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.5 0
K 0 0 -0.1 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
R 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.3 0
H 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
N -0.1 0 -0.1 0.3 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0
Q 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.1 0
S 0.1 0 0.1 -0.4 -0.2 0 0 0 0.4 0 0 0 0 0 0 -0.1 0 0 0.6 0
T 0.2 0 -0.2 0.5 -0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0.6 0
G -0.2 0 0.9 0.5 0.6 -0.1 0 0 -0.1 0 0 0 0 0 0 -0.1 0 0 -0.6 0
P 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0.3 0 0 0 0 0 -0.1 0
C -0.1 0 -0.1 -0.4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 -0.4 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0012 0.4 -0.4 -0.1 -0.2 -0.3 -0.3 -0.8 -0.6 1.3 -0.1 -0.1 -0.1 -0.6 0.1 -0.6 0.7 0.9 0.9 -0.2 -0.3
0024 0.5 -0.5 0.5 1.7 1.1 -0.2 -0.5 -0.2 -0.2 -0.5 -0.5 -0.5 -0.2 -0.2 -0.5 0.1 -0.5 -0.5 1.2 -0.5
Select residue pair below:
i_j Score Prob
0024_0145 1.448 0.99
0017_0024 0.978 0.88
0016_0024 0.718 0.58
0012_0024 0.655 0.47
Local Interactions:
i_j Score Prob
0024_0025 2.725 1.00
0023_0024 0.770 0.66
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
Page generated in 0.1313 seconds.