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Coupling matrix for [Q:0013] and [M:0140]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.7 -0.2 -0.1 -0.5 -0.1 -0.2 0.3 0.1 0.7 0.1 -0.2 -0.2 0.4 -0.1 -0.5 -0.1 0.1 -0.2 0.5 -0.1
F -0.1 0 0 -0.1 0 0 0 -0.1 0.3 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.1 0
I 0.1 -0.1 0 0.1 0 -0.1 0 -0.1 -0.3 -0.3 0 -0.1 0 0.8 0.2 -0.1 -0.1 0.1 -0.2 0
L 0.1 0.3 0.1 0.4 0.4 -0.2 -0.2 -0.3 -0.9 0.3 0 -0.1 -0.8 0.7 0.6 0.2 -0.4 0.6 -0.7 0.2
V -0.2 -0.1 0 0.6 0 -0.1 0 -0.1 0.4 -0.2 -0.3 0.2 0.2 0.1 0.1 -0.1 -0.1 -0.1 -0.2 0
M 0.3 -0.1 0 0.6 0 0 0 -0.1 -0.4 -0.2 -0.1 -0.1 0.1 0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0
W 0 0 0 0 0 0 0 0 -0.2 -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0
Y -0.1 -0.1 0 -0.1 0 0 0 0.3 0.4 -0.3 0.2 -0.1 0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 0
D -0.1 -0.2 0.3 -0.4 -0.1 -0.2 -0.1 0.2 -1.1 -0.7 0 0.6 1.4 -0.4 0.2 0.2 0.3 -0.5 0.9 -0.1
E 0 -0.1 -0.2 -0.2 -0.3 0.4 -0.2 0.8 -1.3 -0.1 1 0.8 1.4 -0.7 -0.3 -0.2 -0.4 0.5 0.3 -0.2
K -0.5 -0.2 0.1 -0.2 0.1 -0.3 -0.2 0.4 1.2 0.1 0.5 -0.6 -0.4 0.3 0.4 0.5 -0.5 -0.4 0 0.1
R 0 0.7 -0.2 -0.4 0.5 0.1 -0.2 -0.6 1.2 0.9 -0.2 0 -0.7 -0.5 -0.6 0.1 -0.4 0.2 0.7 -0.1
H 0 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 0.2 0.5 0.5 -0.1 0.5 -0.5 -0.3 0.2 -0.2 -0.1 -0.2 0.2 0
N -0.4 -0.2 -0.1 -0.3 -0.1 -0.1 -0.1 0.6 1.2 -0.1 -0.2 -0.3 -0.1 0.4 -0.1 -0.2 -0.2 0 0 0
Q 0.5 0.3 0 -0.2 -0.2 0.2 -0.2 -0.7 -0.1 0.3 0.5 0.3 0.1 -0.7 0.6 -0.1 0.2 0 -0.2 -0.1
S -0.1 0.1 -0.1 0.1 -0.1 0.2 -0.1 -0.1 0.6 -0.1 0 0.2 -0.3 0.3 -0.1 -0.1 0.1 -0.4 0.1 -0.1
T 0.4 -0.2 -0.1 0.2 -0.1 -0.1 -0.1 0.1 0.1 -0.2 0.3 -0.3 -0.3 0.6 0 0 0.1 0.2 -0.3 -0.1
G -0.3 -0.1 -0.1 0.6 -0.1 -0.1 -0.1 0.1 -0.4 0.1 -0.2 -0.3 -0.2 -0.1 0.1 0.5 0.8 -0.3 0 0
P 0.3 0.2 0.2 0.4 0 0 0.5 -0.4 -0.7 0.1 -0.2 -0.5 -0.2 0.1 -0.7 -0.2 0.7 0.3 -0.5 0.3
C -0.1 -0.1 0 -0.1 0 0 0 -0.1 -0.3 0 -0.1 0.3 -0.2 -0.2 -0.1 0.3 0 0.6 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0013 0.5 -1.1 -0.6 0.7 -0.3 -0.8 -1.6 -0.8 0.3 1.1 0.7 0.7 -0.3 0 0.7 0.4 0.3 0 1.3 -0.8
0140 0.4 -0.5 -1 0.4 -1 -0.7 -1.1 0 1.9 0.9 0.7 0.1 0.7 0.9 0.3 0 -0.2 0 0.1 -1.2
Select residue pair below:
i_j Score Prob
0013_0140 3.203 1.00
0140_0179 1.121 0.95
0140_0177 0.874 0.79
Local Interactions:
i_j Score Prob
0140_0141 0.914 0.83
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M V G S L ...
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