OPENSEQ.org -1516987032- GREMLIN Submission

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BtS2R

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Coupling matrix for [A:0006] and [R:0007]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	-0.1	0	0.6	0	-0.1	0	0	-0.1	-0.3	-0.1	0.9	0.3	0.4	-0.3	-0.6	-0.1	0.3	0.2	-0.1
F	-0.2	-0.1	0	0.5	0.4	-0.2	0	0	-0.1	0.3	-0.5	0	-0.1	-0.2	1	0.3	-0.3	0	-0.1	-0.1
I	-0.2	0	0	0.8	0	-0.1	0	0	0	-0.2	-0.3	0.2	-0.1	-0.1	0.2	0.1	-0.2	-0.1	0	0
L	0	-0.1	-0.1	0.3	-0.1	-0.5	-0.1	-0.1	0.4	-0.4	-0.6	-0.3	0.2	-0.3	-0.1	0.9	0.9	0.7	-0.2	0.1
V	0.1	-0.1	0	-0.2	-0.1	-0.2	0	0	-0.1	-0.2	0.5	0.4	0.1	-0.2	-0.3	0.5	0.4	-0.1	-0.1	0
M	0.3	-0.1	0	-0.2	-0.1	-0.3	0	0	0	-0.1	-0.3	-0.2	0.4	1	-0.2	0.2	-0.2	-0.1	0.4	-0.1
W	-0.2	-0.1	0	-0.1	-0.1	-0.1	0	0	-0.1	-0.2	0.2	0.1	-0.1	0.1	-0.2	0.4	0.7	-0.1	0	0
Y	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0	-0.1	0	0	0	0
D	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0	-0.1	0	0	0	0
E	-0.1	0	0	0.4	0	-0.1	0	0	0	-0.1	-0.1	-0.1	0	-0.1	0.4	-0.2	-0.1	0	0	0
K	0.1	0.4	0	-0.2	-0.1	0.9	0	0	0	0.1	-0.3	-0.3	-0.1	0.3	-0.3	0.1	-0.3	-0.1	-0.1	0
R	-0.4	-0.1	0	-0.2	-0.1	-0.1	0	0	0.1	0.3	0.4	0.6	-0.2	-0.1	0.2	-0.1	-0.3	0.3	-0.1	0
H	-0.1	0	0	-0.1	0	-0.1	0	0	0	-0.1	0.7	-0.1	0	-0.1	-0.1	-0.2	-0.1	0	0	0
N	-0.2	-0.1	-0.1	-0.2	-0.1	0.2	0	0	0	0.9	0.2	-0.3	-0.1	0.6	-0.3	-0.6	0.5	-0.1	-0.1	0
Q	-0.2	-0.1	0	-0.2	-0.1	-0.2	0	0	0	-0.2	1.2	-0.1	0.8	-0.2	0.1	0.1	-0.2	-0.1	-0.1	-0.1
S	0.5	-0.1	0	-0.3	0	-0.3	-0.1	-0.1	-0.1	0.4	0	-0.2	-0.3	-0.3	1	0.4	-0.1	0.1	0.3	-0.1
T	0.9	-0.1	0.2	-0.3	-0.1	0.1	-0.1	-0.1	-0.1	0.6	-0.3	0.5	-0.3	-0.3	0.2	0.8	-0.5	-0.2	-0.1	-0.1
G	0.4	0	0	-0.1	0	-0.1	0	0	0	-0.1	-0.2	-0.2	-0.1	-0.1	-0.1	0.6	-0.1	0	0	0
P	-0.2	0.8	0	-0.2	-0.1	0.6	0	0	0	-0.2	0.8	0.3	-0.1	-0.2	-0.2	-0.5	-0.2	-0.1	-0.1	-0.1
C	0.3	0	0	-0.1	0.5	-0.1	0	0	0	-0.1	-0.2	-0.1	0	-0.1	-0.1	-0.3	0.3	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0006	0.7	0.5	-0.2	0.6	0.4	-0.3	0.1	-1	-1	-0.6	0	0.1	-0.7	0.1	0.2	0.8	0.8	-0.5	0.2	-0.4
0007	0.5	-0.5	-0.8	0.5	-0.5	0.1	-1	-1	-0.8	0.4	0.9	1.1	-0.1	0.1	0.6	1.2	0.6	-0.1	-0.6	-0.7

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0004_0006	1.329	0.86
0005_0006	1.062	0.64
0006_0007	0.967	0.53

See all coupling residues
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