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Coupling matrix for [L:0004] and [A:0006]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0.2 -0.1 -0.1 0.3 0 -0.1 0 0 0 -0.1 -0.1 0 -0.1 -0.1 -0.2 -0.2 -0.1 0.3 0.6
F 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 -0.1 0 0 0
L 0.1 0.3 -0.1 -0.2 -0.1 0 -0.1 0 0 0 0.3 0.3 0 -0.1 -0.1 0.3 -0.2 -0.1 -0.1 0
V 0.7 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 0
M 0.5 0.1 0.3 -0.3 1.2 -0.1 -0.2 0 0 -0.1 -0.1 -0.2 -0.1 -0.1 0.1 0 -0.3 -0.1 -0.2 -0.1
W 0.4 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0
Y -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0.4 -0.1 0 0 0
D -0.1 -0.1 0 -0.1 -0.1 0 0.4 0 0 0 -0.1 -0.1 0 0.4 -0.1 -0.1 -0.1 0 0 0
E 0 0 0 -0.1 0 0 0 0 0 0 0.4 0 0 0 0 -0.1 -0.1 0 0 0
K -0.1 1 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 0 0 -0.1 -0.1 -0.1 0 -0.1 0
R 0.2 -0.1 -0.1 -0.2 -0.1 0 -0.1 0 0 0.4 -0.1 0.2 0 -0.1 -0.2 0.1 -0.3 0.4 0.3 -0.1
H 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N -0.1 -0.1 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0.4 -0.1 0 0 0
Q 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.2 0.6 0.6 0.3 -0.1 -0.2 0.9 -0.1 -0.1 -0.1 0.2 -0.5 -0.1 0.2 -0.3 -0.6 0.6 -0.2 -0.3 0.1
T -0.2 -0.1 0 0.2 -0.2 0 -0.1 0 0 -0.1 -0.1 0.1 0 -0.1 0.2 -0.3 1 -0.1 0.3 -0.1
G -0.1 -0.1 -0.1 0.6 -0.1 0 -0.1 0 0 0 -0.1 -0.1 0 0 0.2 -0.2 -0.2 0.4 -0.1 0
P -0.1 -0.6 -0.4 0.3 0.1 -0.2 0 -0.1 -0.1 -0.2 -0.1 0.9 -0.2 -0.4 0.3 1.1 1 -0.2 -0.3 -0.2
C 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0004 0.3 -0.6 -0.4 0.2 -0.2 0.3 -0.3 -0.3 -0.2 -0.3 0 0.3 -0.6 -0.3 -0.6 1.1 0.6 0.1 1.3 -0.6
0006 0.7 0.5 -0.2 0.6 0.4 -0.3 0.1 -1 -1 -0.6 0 0.1 -0.7 0.1 0.2 0.8 0.8 -0.5 0.2 -0.4
Select residue pair below:
i_j Score Prob
Local Interactions:
i_j Score Prob
0004_0006 1.329 0.86
0005_0006 1.062 0.64
0006_0007 0.967 0.53
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M G T L G ...
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