OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [H:0310] and [V:0326]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	-0.1	-0.2	0.3	0.1	-0.2	-0.2	0.8	0.1	0	-0.1	0.3	-0.8	-0.2	-0.1	-0.1	-0.2	0.1	0.7	-0.4
F	0.7	-0.2	-0.2	-0.2	-0.3	0	-0.1	-0.2	-0.2	0.3	0	0.6	-0.3	0.3	0.4	0.1	-0.2	0.1	-0.1	-0.2
I	0	0	0.4	0.2	0.3	0.7	0	0	-0.3	-0.6	0	-0.2	0.1	-0.4	-0.3	-0.4	-0.3	0.2	0.1	-0.2
L	0.4	0.6	0.8	-0.1	0	0.4	0	-0.7	-0.1	-0.1	0	-0.2	0	-0.6	-0.5	0.1	0.1	0.6	-0.2	-0.2
V	0.1	-0.2	0.4	0.5	0.2	0.2	-0.2	-0.3	-0.6	0	0.2	-0.1	0	-0.2	-0.2	0	-0.5	0.1	0	-0.1
M	0.1	0.1	0.3	-0.2	0.3	0.1	-0.2	0.1	0	-0.3	0.1	-0.3	-0.1	0.1	-0.4	-0.1	0	0.8	-0.1	-0.3
W	-0.3	0.4	0.1	-0.1	-0.2	-0.1	0.2	-0.1	0.3	-0.6	-0.2	0.3	-0.2	0.3	-0.4	-0.3	-0.4	-0.2	0.1	-0.1
Y	-0.1	-0.1	0.2	-0.4	-0.2	0.1	-0.2	-0.3	-0.3	-0.1	-0.4	0.3	0.4	0.6	1	0.1	0	-0.3	-0.5	0.5
D	0.4	-0.3	-0.5	-0.3	0	0.8	-0.3	-0.3	-0.2	-0.1	0.3	0.3	-0.3	-0.3	0	0.6	1	-0.1	0.1	-0.1
E	-0.1	-0.2	-0.3	0.4	-0.2	-0.4	-0.2	-0.4	-0.3	-0.1	0.1	0.3	0.8	0.2	0.2	0.1	0.1	-0.3	0.6	0.7
K	0	-0.3	0	-0.5	-0.3	0.1	0.2	0.4	0.6	0.4	-0.4	-0.3	0.3	0.5	-0.1	0	-0.1	-0.1	-0.1	0.1
R	-0.3	-0.3	0.1	0.3	-0.2	0.7	-0.4	0.1	0.9	0.6	-0.5	0	0.2	-0.1	-0.1	0.2	0.1	0	-0.1	-0.6
H	0.5	-0.1	-0.2	-0.7	0	-0.5	-0.1	-0.4	0.3	0	0.1	-0.2	-0.1	0.1	0	0.4	0.6	-0.5	-0.3	0.9
N	-0.6	0.2	-0.6	-0.4	-0.1	0.3	0.2	0.2	0.1	0.3	0.6	-0.2	-0.2	0	0.4	-0.2	0.1	0.2	0.3	-0.1
Q	-0.2	0.1	0.1	0.1	0.1	-0.3	-0.1	-0.3	-0.4	-0.1	0.5	0	0	0.2	0.2	0.1	0	0	0.2	-0.4
S	0	-0.5	-0.2	0.1	-0.2	-0.4	0.8	-0.9	0.4	0.2	0.4	0.1	0.2	0.1	0.3	0	0.2	-0.2	0.1	0.1
T	0	0.1	0.4	0.8	0.6	-0.3	-0.2	-0.5	0.4	0	0.1	-0.1	-0.1	0	-0.4	-0.3	0.1	-0.3	-0.2	0.1
G	-0.3	1.2	-0.3	0	-0.3	-0.1	0.3	0.9	-0.1	-0.2	0.2	0.8	0	-0.2	0	-0.2	-0.1	0	0	-0.4
P	-0.1	-0.3	-0.1	-0.2	0.2	-0.8	-0.5	1.1	-0.1	0.1	-0.2	-0.1	0.1	-0.3	0	0.5	0.7	0.8	-0.8	0.7
C	-0.4	-0.2	-0.3	0.3	0.6	-0.2	0.1	0.2	0.2	0.4	0.3	-0.4	-0.5	0.1	0.1	0.1	-0.1	-0.4	-0.5	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0310	0.1	-0.9	-0.5	-0.1	-0.2	-0.9	-1.7	-0.7	0.8	0.5	0.4	0.6	-0.3	0.9	0.6	0.7	0.2	0.9	1.1	-0.9
0326	0.3	-0.8	-0.2	-0.1	0.2	-1.1	-1.6	-0.9	1.1	1	1.1	1.1	-0.3	0.8	0.6	1.3	0.9	0.2	-0.1	-0.9

Select residue pair below:

i_j	Score	Prob
0306_0310	1.027	0.94
0310_0326	0.753	0.69
0310_0328	0.555	0.36

Local Interactions:

i_j	Score	Prob
0308_0310	1.901	1.00
0310_0311	1.195	0.98
0309_0310	1.157	0.97

See all coupling residues
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