May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [A:0272] and [S:0273]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0.2 0.5 0.6 0.7 0.3 0.7 -0.1 -0.2 -0.4 -0.4 -0.5 0.1 -0.3 -0.2 0.3 0.2 -0.7 -0.4 0
F 0.6 0.3 -0.2 -0.1 0.3 -0.4 -0.2 -0.3 -0.3 -0.2 -0.1 -0.4 0.3 0.1 -0.1 0.5 0.5 0.1 0 0.1
I 0.5 -0.3 -0.1 -0.4 0.4 -0.1 -0.2 -0.1 -0.1 -0.2 0.1 -0.5 0 0.2 0.1 1 0.6 0.6 -0.2 0.8
L 0.2 0.1 -0.2 0.1 0.2 0.3 0.1 0.3 -0.1 0.3 -0.2 0.2 -0.4 -0.3 -0.5 0.6 0.3 0.9 0 0.1
V 0.4 0.1 0.2 -0.2 0.1 0 -0.4 -0.2 -0.3 -0.2 0 -0.3 -0.2 -0.1 0.3 1.1 0.6 0.7 -0.4 0.1
M 0.1 0.5 0.1 -0.6 0 -0.5 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0.1 0.1 0.6 0.4 -0.1 0.5 0.1
W 0.6 0.1 -0.4 0.1 -0.3 -0.1 0 -0.1 0 0 0 -0.1 0 -0.1 0 -0.2 0.5 0.7 0.1 -0.3
Y 0.4 -0.6 -0.3 0.1 0 0.6 -0.1 -0.3 -0.2 -0.1 -0.1 0.2 0.1 -0.2 0.1 0.6 0.7 0.1 -0.2 0.3
D -0.1 0.2 0.9 0 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 -0.6 -0.1 0 -0.2
E -0.1 0.2 -0.2 -0.1 -0.3 0 0 0 0 0.2 0 0.5 0 0 0 -0.4 -0.1 -0.1 0 -0.1
K -0.2 0.2 0.1 0.4 -0.2 0 0 0 0 0 0 0 0 0 0 -0.5 -0.3 -0.1 0 -0.1
R 0.3 -0.1 -0.4 -0.2 -0.4 -0.1 0 0 0 0 0 0.7 0 -0.1 0 -0.3 -0.3 -0.1 0.5 -0.3
H 0.1 0.2 -0.2 -0.1 -0.1 0 0 0.2 0 0 0 0 0.2 0.1 0 -0.9 -0.2 -0.2 0.1 0.4
N -0.2 0 -0.1 -0.1 0.1 0 0 0 0.2 0.1 0 0 0 0 0 -0.4 -0.2 0.1 0 -0.1
Q -0.6 -0.2 -0.1 -0.1 -0.6 -0.1 0 0 0 0 0.2 0.1 0 0 0 0 0.7 -0.2 0 -0.2
S -0.3 -0.2 0 0.5 0.4 -0.1 -0.1 0.5 0.1 -0.1 -0.1 0.4 -0.1 -0.2 -0.1 -0.2 -0.1 0.7 0.1 -0.4
T 0.1 0.1 0.4 -0.1 -0.1 0.1 -0.1 0.4 -0.1 0.2 0 -0.2 -0.1 0.3 -0.1 0.1 0.2 -0.5 0.1 -0.2
G -0.3 0.1 0.7 0.2 0.5 -0.4 -0.1 0 0.1 -0.1 0.1 0 -0.1 0.5 0.2 -0.4 -0.6 -0.6 -0.1 0.3
P -0.2 -0.1 -0.2 0.3 -0.1 0.2 0 0 0.2 0 0 0.2 0 0 0 -0.7 0.1 -0.1 0 -0.1
C 0.2 -0.2 0.5 -0.1 0.5 0.4 -0.1 -0.2 0.1 -0.2 -0.1 0 -0.1 -0.2 -0.1 0.4 -0.1 -0.9 -0.1 -0.2
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0272 0.8 0.9 1.8 2.2 1.8 0.8 0.4 0.7 -0.8 -1 -1.3 -1.3 -0.8 -1 -1.8 0.6 0.3 -0.4 -1.1 -0.4
0273 1.3 0.6 1.3 1 1.3 -0.2 -0.9 -0.1 -0.8 -1 -1.1 -0.1 -0.8 -0.3 -0.6 -0.3 1.2 0.2 -0.5 0.4
Select residue pair below:
i_j Score Prob
0272_0305 2.214 1.00
0272_0282 2.030 1.00
0272_0303 1.335 0.99
0272_0312 0.913 0.87
0262_0272 0.685 0.58
0264_0272 0.533 0.33
Local Interactions:
i_j Score Prob
0270_0272 1.051 0.94
0272_0273 0.747 0.68
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0178 seconds.