OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [V:0262] and [A:0272]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.9	0.4	0	0.2	0.6	0	-0.2	-0.2	-0.2	-0.3	-0.1	-0.4	-0.1	0.4	-0.8	0	0.4	-0.2	-0.5	0.1
F	0	-0.4	0.1	0	-0.1	0.4	0.1	0	0	0	0	-0.1	0	-0.1	0	-0.2	-0.2	0.2	0	0.1
I	-0.2	0.2	0.6	0.7	0	-0.1	-0.2	-0.2	0.1	0.4	-0.1	-0.1	-0.1	-0.1	-0.1	-0.8	0.3	-0.2	0.1	-0.1
L	-0.3	0.1	0.3	0.7	-0.1	0.1	0.4	0	-0.2	-0.1	-0.1	-0.2	-0.2	-0.1	-0.2	0.2	0.2	-0.2	-0.2	-0.7
V	0.5	0.3	0.3	0.4	0.1	0.1	-1.1	-0.4	0	-0.2	-0.1	-0.3	0.2	-0.2	-0.2	-0.1	-0.2	-0.5	0	0.7
M	-0.2	-0.3	0.3	-0.2	0	-0.1	0.2	-0.3	0	0	0	-0.1	0	0	0	0.2	-0.4	0.8	0	-0.3
W	-0.8	-0.1	0.1	-0.3	0	0.1	-0.1	0.6	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	0	-0.1
Y	-0.9	0	0.1	0.8	-0.3	0	0.3	0.9	-0.1	0	0	-0.1	0	0.2	-0.1	-0.3	0	-0.3	-0.1	-0.6
D	0.1	-0.6	-0.4	-0.4	0.2	0.2	-0.7	-0.5	0	-0.2	-0.1	2	0	-0.2	1.9	-0.1	0	0.2	0.1	-0.6
E	-0.1	-0.2	-0.1	0.1	-0.1	0	-0.1	-0.4	0.1	0.1	-0.1	-0.1	0.1	-0.1	-0.3	-0.2	0.4	0.1	-0.2	1
K	0.2	0.4	-0.3	-0.3	0	-0.2	0.5	0.2	0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0	0	-0.4	0.8	0.1	-0.1
R	0.4	0.2	-0.1	0.4	0	0.3	-0.5	0.1	-0.1	-0.2	-0.1	-0.2	-0.2	-0.1	-0.2	0.3	0.2	0.3	0.1	0.1
H	-0.3	0.1	-0.2	-0.1	-0.2	-0.5	-0.3	1.4	-0.1	-0.1	0	-0.1	0.2	-0.1	0.1	0.2	-0.2	0.6	-0.1	0
N	-0.1	-0.4	0.2	-0.2	0.3	0.6	0.3	-0.1	-0.1	0	0	-0.1	-0.1	0	-0.1	0.3	0	-0.3	0	-0.1
Q	0.1	0.1	-0.1	0.1	0.2	0	0.3	0	0	-0.1	0.1	-0.3	-0.2	-0.1	-0.3	0.3	0.4	-0.4	-0.1	0.2
S	0.6	0	0.1	0.2	0.3	0.1	0.3	-0.1	0	-0.2	-0.2	-0.5	0.1	0.3	-0.5	0	0.2	-0.2	0.5	-0.2
T	0.3	0.1	0.3	0.2	0	-0.2	0.3	0.4	0.2	0.1	-0.1	-0.3	0	-0.1	-0.3	-0.3	0.2	0.2	0	0
G	0.2	0.3	-0.4	-1	0	0	1.2	0	-0.1	-0.1	-0.1	-0.2	0	-0.1	-0.2	0.5	0	0.1	-0.1	0
P	-0.3	-0.1	0	-0.6	-0.2	-0.2	-0.1	0	0	0	0	0.5	0	0	0.2	0.6	-0.1	0.1	0	-0.2
C	0.3	0.8	0.2	0.7	0.3	0.3	-0.3	-0.2	0	0.1	0.1	-0.3	0.1	-0.1	-0.3	-0.1	-0.4	-0.9	-0.2	0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0262	0.7	-0.3	0	0.2	0.8	-0.7	-1.3	-0.5	0.3	0.2	0.1	0.2	0	-0.1	0.1	0.8	0.9	0	-1.1	0.6
0272	0.8	0.9	1.8	2.2	1.8	0.8	0.4	0.7	-0.8	-1	-1.3	-1.3	-0.8	-1	-1.8	0.6	0.3	-0.4	-1.1	-0.4

Select residue pair below:

i_j	Score	Prob
0272_0305	2.214	1.00
0272_0282	2.030	1.00
0272_0303	1.335	0.99
0272_0312	0.913	0.87
0262_0272	0.685	0.58
0264_0272	0.533	0.33

Local Interactions:

i_j	Score	Prob
0270_0272	1.051	0.94
0272_0273	0.747	0.68

See all coupling residues
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