OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [L:0261] and [F:0263]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	1	0.7	0.4	0.1	-0.4	0.6	0.7	-0.1	-0.5	-0.2	-0.5	0.6	0.2	0	-0.4	-0.1	-0.1	-0.2	-0.9
F	0.2	0.1	0.4	0.5	0.4	0.7	-0.2	-0.5	-0.2	0	0	-0.2	-0.5	-0.3	0.3	0.3	0.3	-0.1	-0.1	-0.6
I	0.2	0.2	0.1	0	0.3	-0.2	-0.1	0.2	-0.3	0	0.1	0	0.1	0.1	-0.1	0.3	0.1	-0.5	0.3	0.3
L	0.4	0	-0.2	0	0.5	0	-0.2	0.3	0.1	-0.3	-0.2	0.1	-0.2	0	-0.3	0.2	0.7	-0.3	-0.1	0.1
V	0.7	0.6	-0.1	0.1	0.3	0.2	0	0.7	-0.5	0.4	-0.3	-0.3	0.4	-0.5	-0.3	0.1	-0.2	-0.1	0	0.6
M	-0.4	0	0.1	0.1	0.5	0	-0.4	0.7	-0.3	-0.2	0	-0.1	0.5	0.4	-0.2	0.1	0.3	-0.6	0.3	-0.1
W	-0.1	-0.5	-0.3	-0.1	-0.2	-0.1	0.8	-0.1	0	0	0	0	0	0	0.1	-0.1	-0.1	0	0	-0.1
Y	-0.2	0.1	-0.5	0.3	0.2	-0.1	0	0	0	0.2	0	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	0	-0.1
D	0.2	-0.4	-0.1	-0.2	-0.2	0	-0.3	0	0.2	0	0	0	0	0	0	0	0	0	0	0.2
E	0.1	-0.8	-0.3	0	0.2	-0.1	-0.5	-0.1	0	0	0	0.1	0.2	0.2	0	-0.1	-0.1	0.4	0	-0.1
K	0.1	-1	-0.1	-0.1	-0.2	0.1	-0.3	-0.2	0.1	0	0.5	0.3	0.1	0	0	-0.1	0.1	0.2	-0.1	0.1
R	-0.1	-0.1	-0.2	-0.4	-0.1	0.3	-0.4	0.1	0.2	0.1	0.2	-0.1	-0.1	0	0	0.3	0.2	-0.1	-0.1	0
H	0.1	-0.3	-0.3	-0.4	-0.3	-0.1	0	-0.3	0	0.2	0	0.4	0.2	0	0.2	-0.1	-0.1	0.2	-0.1	0.1
N	0	-0.6	-0.2	-0.2	-0.5	-0.2	0.7	-0.4	0.2	0	0	-0.1	-0.1	0.2	-0.1	0.5	-0.2	0.1	-0.1	0
Q	0	-0.5	-0.1	-0.4	-0.4	0.1	0.2	0	0	0	0	0.5	-0.1	0	0.2	-0.1	-0.1	-0.1	0.1	0.4
S	-0.1	0.5	0.3	0.4	0.1	-0.3	-0.5	-0.7	0.2	-0.1	0.3	-0.3	-0.2	-0.3	0.4	0.1	-0.2	0.3	0.4	0
T	-0.2	0.2	0.1	0.2	0.1	-0.2	0.1	-0.1	-0.1	0.1	0	0.1	-0.6	0.2	0	-0.1	0.1	0	0.2	0.2
G	-0.4	0.5	0.5	0.1	-0.7	0.4	0.3	0.4	0	0.2	-0.1	-0.2	0	-0.1	-0.2	0	0	-0.2	-0.3	0.1
P	-0.1	0.4	0.3	0.2	0.3	0.5	0.2	-0.5	0	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	-0.3	-0.2	0.1	0	-0.1
C	-0.1	1.1	0.3	-0.1	0.3	-0.2	0.5	0.6	-0.2	-0.3	0.2	0	-0.3	-0.2	0.2	-0.5	-0.6	0.7	-0.4	-0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0261	1.1	0.7	1.2	0.9	0.6	0.6	-1.3	-0.5	-1.1	-0.7	-0.5	-0.5	-0.7	-0.8	-0.9	0.7	0.6	0.5	0.1	0.5
0263	0.5	0.6	0.6	1.1	1	0.3	-1	0.1	-0.9	-0.6	-0.3	-0.3	-0.6	-0.6	-0.2	0.3	0.1	-0.2	-0.2	0.2

Select residue pair below:

i_j	Score	Prob
0219_0261	1.396	0.99
0231_0261	1.343	0.99
0229_0261	1.272	0.99
0237_0261	0.940	0.89
0217_0261	0.807	0.76
0261_0273	0.800	0.75
0261_0271	0.662	0.54

Local Interactions:

i_j	Score	Prob
0261_0262	0.884	0.84
0260_0261	0.591	0.42
0261_0263	0.559	0.37

See all coupling residues
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