OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [F:0230] and [S:0238]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0.3	0.1	0.1	0.2	-0.6	0.1	0.4	0.2	-0.1	-0.5	-0.1	0.2	0.1	-0.1	0.4	0.1	-0.5	-0.3	-0.5
F	-0.5	0.2	-0.3	-0.5	-0.2	-0.1	-0.2	-0.4	0.1	-0.1	0.1	0.3	-0.6	-0.5	0.2	0.3	0.4	1.3	-0.1	0.7
I	-0.2	-0.2	0.2	0	-0.2	-0.5	-0.2	-0.1	0.4	0.5	0.2	0.3	-0.1	0.1	0	0.5	0.1	0	-0.2	-0.1
L	0.3	-0.4	0.4	0.3	-0.1	0	0.1	0.2	-0.9	0.6	-0.4	0	0.3	-0.4	0.8	0.4	0.4	0.1	0.3	-0.9
V	0.2	-0.4	-0.4	0.3	-0.2	0.2	0.2	-0.3	0.3	0.5	0	0.2	-0.1	-0.1	0.1	0.8	0.2	-0.1	-0.1	-0.2
M	0.1	0	-0.3	0.1	0.7	0.3	0.1	0.5	-0.1	-0.4	0.7	0	-0.3	-0.3	-0.2	-0.6	0.2	-0.1	-0.1	-0.1
W	-0.1	-0.1	0.4	-0.1	-0.2	0	0	0.1	0	-0.1	0	-0.1	0.3	-0.1	-0.1	-0.2	-0.1	0.2	0	-0.1
Y	-0.6	0.2	0.7	-0.4	0.5	-0.3	0.1	0.3	-0.2	0.2	-0.7	0.6	-0.6	-0.2	-0.2	-0.5	-0.2	0.3	0.1	0.5
D	-0.1	-0.1	0.1	0.1	-0.2	-0.1	0	-0.1	0.1	-0.1	0.1	0	0	0.1	0.3	-0.2	0	-0.1	0	0
E	-0.2	0.2	-0.1	-0.1	0.1	0	0	-0.2	0.2	-0.1	0.4	-0.3	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	0	0.1
K	-0.1	0.1	-0.1	-0.1	-0.1	-0.1	0	-0.2	0	-0.1	0.3	-0.1	0.1	-0.1	-0.1	-0.2	0.1	0.2	0	0.2
R	-0.1	0.2	-0.3	0	0.1	0.5	-0.1	0.1	-0.2	0.2	-0.1	0	0.1	-0.2	-0.3	-0.1	-0.3	-0.2	0	0.6
H	0	-0.1	-0.2	-0.2	0	-0.1	0	-0.2	0	0.1	-0.3	0.8	-0.2	-0.1	0	0.1	0.2	0.2	0	-0.1
N	0	-0.3	0	0.5	-0.5	-0.2	-0.1	-0.5	-0.1	0.1	-0.3	-0.7	1.2	0.1	0.6	-0.2	0.1	0	0.2	-0.3
Q	0.5	-0.1	0.1	0.1	-0.2	-0.1	0	-0.3	0.4	-0.1	-0.3	-0.2	0	0	-0.2	0	0.2	-0.1	0	-0.1
S	-0.1	-0.1	0.4	0.1	-0.1	0.5	-0.2	-0.2	-0.4	-0.3	0.6	0.4	-0.2	0.8	0.1	-0.3	-0.5	-0.2	-0.4	0.5
T	0.2	-0.6	0.6	-0.3	0	0.1	-0.5	-0.7	-0.1	-0.7	1.1	0.4	-0.1	0.4	0	0.1	0	-0.1	0.4	0.3
G	0.4	0.5	0	0.7	0.7	0.7	0.6	0.8	-0.6	-0.7	-0.7	-0.2	-0.1	0.2	-0.5	-0.1	-0.4	-0.6	0	-0.1
P	-0.1	0.6	-0.5	-0.1	-0.3	-0.2	0.3	1	-0.1	-0.4	0.4	-0.8	-0.1	-0.2	0.3	0.3	0	-0.1	-0.1	-0.3
C	0.4	-0.1	-0.1	0.2	0.5	0.1	-0.2	-0.2	0.4	0.5	-1	-0.6	-0.2	0.4	-0.4	0.3	0	0.3	0.1	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0230	0.9	0.3	0.8	1.2	1	0	-0.9	-0.3	-0.5	-0.8	-0.8	0	-0.6	-0.4	-0.4	0	0.7	0	-0.5	0.1
0238	0.7	-0.2	0.1	0.3	0.7	-0.5	-0.6	0.9	-0.8	0.1	-0.1	0.5	0.2	-1	0.4	0.7	0.7	0.1	-0.9	-0.1

Select residue pair below:

i_j	Score	Prob
0238_0250	1.970	1.00
0238_0247	1.818	1.00
0234_0238	1.112	0.96
0230_0238	1.089	0.96
0232_0238	0.719	0.64
0210_0238	0.643	0.51
0211_0238	0.607	0.45

Local Interactions:

i_j	Score	Prob
0236_0238	1.620	1.00
0238_0240	0.561	0.37

See all coupling residues
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