May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
mep50 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [P:0211] and [S:0238]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.1 -0.5 -0.1 0.2 0 -0.2 -0.2 -0.1 0.9 0.4 0.1 0.1 -0.4 -0.5 0.4 0.5 -0.3 0.2 -0.3 0
F 0.3 0 0.3 -0.2 0.9 -0.1 0.5 0.6 -0.2 0.5 0.1 0 -0.7 -0.3 -0.4 0.1 -0.4 -0.6 -0.2 0
I 0 -0.5 -0.2 0.2 0 0.1 -0.3 -0.2 0 -0.3 -0.1 -0.3 0.2 1 0.6 -0.1 -0.4 0.3 0.2 -0.3
L 0.8 0.1 0.1 0.1 0.2 0.3 -0.3 -0.1 -0.7 -0.5 -0.3 -0.2 0.2 0.4 0.2 0.1 0.1 0.3 0.1 0.1
V 0.2 -0.2 0.1 -0.2 0.2 -0.1 -0.3 -0.4 -0.1 0.5 0.4 -0.4 -0.2 0.7 -0.2 -0.2 0.1 -0.5 0.5 0.3
M 0.8 0.3 -0.2 0.7 -0.5 -0.3 -0.1 0.1 -0.3 0.2 0 -0.1 -0.4 0.1 -0.1 0 0.6 -0.3 -0.1 -0.4
W -0.1 0.1 0 -0.1 -0.2 -0.1 0 -0.4 -0.1 0.1 0.1 0.4 0 -0.2 -0.3 0.5 -0.3 -0.1 0 -0.2
Y -0.4 -0.3 0.7 -0.4 1 -0.2 -0.1 0.5 0.1 -0.5 -0.6 -0.4 0.1 -0.4 0.2 -0.5 0 0.2 0.5 0.2
D 0.3 -0.1 0.1 0 -0.1 0.3 0.3 -0.2 0.2 -0.4 0.1 0.1 0.2 0.1 0.4 -0.2 0.3 -0.1 -0.2 -0.3
E 0.7 0 0.1 0 0 0 0.6 0.3 -0.8 -0.6 0.7 0.4 0.4 -0.6 -0.2 -0.1 -0.3 -0.3 -0.3 0.5
K -0.7 -0.2 0 -0.5 -0.3 0.8 0 -0.1 -0.5 0.1 0.7 0.3 0.6 -0.1 -1 0 0.6 0.2 -0.3 0.1
R -0.3 0.7 -0.6 -0.4 -0.3 -0.3 0 -0.1 1.4 1 -0.5 0 0.3 -1.1 0.3 -0.2 0.2 -0.1 -0.1 -0.4
H -0.4 0.8 0.6 0.7 -0.2 0.1 -0.1 -0.1 -1 -0.4 0.5 0.3 0 -0.4 -0.3 -0.2 -0.9 0.2 -0.4 0.1
N -0.1 -0.2 0 0 -0.4 -0.4 -0.4 0.3 0.9 0.2 0.3 0.1 0.3 0 0.2 0 -0.1 -0.5 -0.2 0.2
Q 0.6 0.2 -0.8 0.2 0.3 -0.4 0.1 -0.2 -0.4 -0.3 -0.2 -0.3 0.1 0.8 0.2 0.3 0.1 0.2 -0.3 -0.1
S -0.4 -0.1 -0.3 -0.1 0 0.2 -0.3 -0.2 0.2 0.1 0 -0.1 0.2 -0.4 0.5 -0.1 0.3 0.6 0.3 -0.1
T -0.4 0.1 0.1 -0.4 -0.4 0.1 0.2 0.2 0.5 0.1 -0.5 0 0 0.5 -0.4 0.4 -0.1 0.3 -0.1 0.4
G 0 -0.1 0 0.2 0.1 0.5 -0.4 0.1 0.3 0.1 -0.1 -0.2 -0.8 -1.3 0.1 0.1 0.6 -0.1 0.4 0.4
P -0.2 0.3 0.1 0.3 0.3 -0.4 0.3 0.2 -0.1 -0.1 -0.2 0.1 0.1 -0.7 -0.3 -0.1 0.1 0.1 0.1 0
C 0 -0.2 -0.2 0 -0.4 -0.2 0.4 0.1 0.1 0 -0.1 0.6 -0.3 0.6 -0.1 -0.2 -0.2 0 -0.1 -0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0211 0.1 -0.1 0.2 0.8 0.3 -0.5 -1.5 -0.8 0.6 0.5 0 0.2 -1.3 0.1 -0.3 0.6 0.3 0.2 0.6 -0.8
0238 0.7 -0.2 0.1 0.3 0.7 -0.5 -0.6 0.9 -0.8 0.1 -0.1 0.5 0.2 -1 0.4 0.7 0.7 0.1 -0.9 -0.1
Select residue pair below:
i_j Score Prob
0238_0250 1.970 1.00
0238_0247 1.818 1.00
0234_0238 1.112 0.96
0230_0238 1.089 0.96
0232_0238 0.719 0.64
0210_0238 0.643 0.51
0211_0238 0.607 0.45
Local Interactions:
i_j Score Prob
0236_0238 1.620 1.00
0238_0240 0.561 0.37
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M R K E T ...
Page generated in 0.0264 seconds.