OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [T:0197] and [P:0200]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	-0.1	-0.3	0.5	0	0	0.7	-0.1	-0.1	-0.5	-0.3	0.3	0.4	-0.3	-0.4	0.2	-0.2	0.9	-0.2	-0.1
F	-0.1	0.2	1.1	-0.3	0.2	-0.1	-0.8	-0.1	-0.3	0.1	0.3	0	-0.1	-0.1	0	0.1	0.3	-0.7	0.7	0.2
I	0.3	-0.3	0.3	-0.1	0	0.3	-1	-0.1	0.1	0.6	0.1	-0.1	-0.4	0.2	0.1	0.2	0.7	0	0.2	0.1
L	-0.2	0.3	0.4	0	0.2	0.6	-1.3	1	0.1	-0.2	0.2	0.2	-0.1	0.3	0.5	0	-0.2	0	0.1	0
V	0.2	-0.3	-0.3	-0.2	0	-0.1	-0.2	-0.6	0.3	0.5	0.3	0.6	-0.2	-0.1	0.4	0	-0.1	0.4	0.7	-0.5
M	-0.1	0.3	0.4	0.1	0	0.4	-0.8	1.3	0.2	-0.3	0.2	0.4	0	-0.4	-0.1	-0.4	0.1	0.1	-0.5	0
W	-0.2	-0.1	0.2	-0.2	0.1	-0.7	-0.2	-0.5	0.6	0.7	0	0.3	-0.4	0.4	-0.1	-0.5	-0.3	-0.4	1.2	-0.3
Y	-0.5	1	0.9	0	0.3	-0.1	-0.4	0.2	-0.1	0.2	0.2	-0.1	-0.8	-0.1	0.3	-0.5	-0.1	-0.6	0.7	0
D	0.3	0	-0.1	0.3	0.1	-0.1	-0.3	-0.2	0.4	0.8	-0.3	0	-0.6	-0.6	-0.2	0.3	0.3	-0.1	-0.1	0.2
E	-0.1	-0.2	0	0.2	-0.4	0.8	-0.4	-0.4	0	0.2	0.6	-0.3	-0.6	-0.5	-0.1	0.2	-0.1	0.1	-0.6	-0.3
K	0.2	-0.2	-0.1	-0.6	0.1	0	0.3	-0.2	0.2	0.1	0.3	-0.5	-0.1	0.1	0.1	-0.1	0.2	0.1	-0.6	0.2
R	0.3	-0.9	-0.4	0.3	-0.2	0.5	0.1	-0.7	0.4	0.4	0.6	-0.1	-0.4	0.2	0.1	0.4	-0.1	-0.2	-0.4	0
H	0.1	0.2	-0.4	0.4	-0.1	0	0.3	-0.3	0.1	-0.3	0.5	0.2	-0.2	0.2	-0.3	0.3	-0.1	-0.4	-0.5	-0.2
N	-0.3	0.3	-0.4	-0.4	0.8	-0.2	0.2	0.6	0	-0.6	-0.4	0.2	-0.2	0.6	0.1	0.1	-0.3	0	-0.5	-0.3
Q	-0.1	0	0.3	0.2	-0.4	-0.3	0.3	-0.2	0.2	0.4	0	-0.1	-0.2	-0.2	0.2	0.1	0.4	-0.4	0	-0.1
S	-0.3	-0.1	-0.9	0.8	-0.1	0.1	0.9	-0.1	-0.5	-0.3	0	0.3	1.1	-0.2	-0.5	0.2	-0.1	0.3	-0.2	-0.5
T	0	0.3	-0.2	0.5	-0.1	0.4	1.8	0.1	-0.6	-1.1	-0.3	0	0.3	0	-0.4	-0.5	0	0.1	0.2	0
G	0.3	-0.4	-0.4	0	-0.2	-0.4	0.2	-0.3	-0.2	0.1	-0.8	-1.2	0.2	0.3	0	0.3	-0.2	0.8	0.6	0.3
P	0.3	-0.5	-0.1	-0.6	-0.3	-1	-0.4	-0.7	-0.2	0.1	0.1	0.5	0.3	0.1	-0.1	0.5	0	0.4	0.5	0.9
C	0.3	0.2	-0.2	0.1	-0.1	-0.3	0.7	-0.2	-0.3	-0.4	-0.1	-0.3	0.4	0.8	0.7	-0.3	-0.3	0.2	-0.6	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0197	0.7	0.4	1.1	1.9	1	0.6	-1.1	-0.2	-0.3	-1	-0.6	-0.4	-1	-0.5	-0.7	0.2	0.9	-0.3	0.5	-0.8
0200	0.4	-0.6	-0.7	0.6	-0.5	-0.8	-1.4	-1.4	0.3	0.4	0.6	0.5	-0.5	0.6	0.2	0.8	0.1	1.8	0.6	-1

Select residue pair below:

i_j	Score	Prob
0175_0197	1.222	0.98
0183_0197	1.045	0.94
0197_0200	0.699	0.60
0139_0197	0.638	0.50

Local Interactions:

i_j

Score

Prob

See all coupling residues
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