OPENSEQ.org -1516281329- GREMLIN Submission

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Coupling matrix for [Q:0139] and [T:0197]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0	-0.1	0.1	-0.1	0.3	-0.1	-0.4	0.3	0.3	-0.4	-0.1	0	0	0	-0.1	-0.1	-0.4	0.8	0.1
F	-0.1	1.2	0.1	0	0.1	-0.1	-0.1	0.6	-0.5	-0.2	0.1	-0.2	-0.5	0.5	-0.4	-0.1	0.2	0.3	-0.1	-0.4
I	-0.3	0.1	0.3	0.2	-0.1	0.1	-0.1	0.1	0.6	-0.6	0.1	0.2	0	-0.5	0.4	-0.1	-0.1	-0.2	-0.1	0.3
L	-0.1	-0.4	0.3	0.3	0.4	0	0	0.1	-0.4	0	0.3	0.4	0.4	-0.3	0	0.1	0.1	-0.3	0.5	-0.2
V	-0.2	-0.1	-0.2	0.3	0.1	0.4	-0.1	0	0.1	0.2	0.3	0.1	-0.6	-0.3	0.3	-0.2	-0.1	0.1	0.7	0.3
M	-0.4	-0.8	0.4	0.2	0.2	-0.1	0.7	0.1	0	0.1	-0.1	-0.6	-0.1	-0.4	0.2	0.3	0.5	-0.2	-0.1	0.1
W	0	0.6	0.7	0.8	0.6	0.6	0.5	-0.3	-0.1	-0.5	-0.8	-1	-0.2	-0.3	-0.5	-0.6	0.5	-0.5	0.2	0.1
Y	-0.2	0.4	0.8	0.4	0.3	0.1	0.8	-0.5	-0.1	-0.6	-0.2	-0.3	-0.4	0.7	-0.5	0	-0.1	0.2	-0.8	0.1
D	0	-0.3	-0.2	-0.7	0.2	-0.3	0.3	-0.3	0	-0.3	0	1	0.2	-0.1	0.4	-0.2	-0.3	0.8	-0.7	-0.1
E	-0.5	0	-0.4	-0.1	-0.6	-0.6	-0.8	1.3	-0.3	-0.3	1.1	2	1.3	0.3	-0.8	-0.2	-0.1	-0.7	-0.5	0
K	0.2	0	0.2	-0.2	-0.2	-0.3	-0.8	-0.3	0.6	1.6	-0.3	-1.4	-0.4	0.4	-0.2	0.1	0.2	0.2	0.7	-0.3
R	0.7	0	-0.3	0	0	0.1	-0.8	-0.5	0.5	1	-1.1	-1	-0.4	0.1	-0.3	0.6	0.3	1.4	0	-0.1
H	0.2	-0.4	0.2	-0.1	0	0	1	-0.5	0.2	-0.1	0	-0.3	0.3	-0.4	-0.7	0.3	0.2	0	0	-0.1
N	0	-0.5	0.6	0.2	0.3	-0.2	0.8	-0.1	-0.3	-0.5	-0.1	1.3	-0.1	0.1	0.1	0.2	0.1	-0.7	-0.4	-0.7
Q	0.2	0.4	0	-0.3	0.1	0.3	-0.3	-0.5	-0.7	0.1	0.1	-0.5	-0.3	-0.2	0.2	0.2	0.5	0.1	0	0
S	0.1	0.2	-0.1	-0.2	0	0	-0.1	-0.2	-0.5	0	0.6	0.5	-0.3	0.1	0.2	-0.1	-0.1	-0.3	0.1	0.7
T	0.2	-0.1	0.2	0	0.4	0.1	-0.8	-0.2	0	-0.4	-0.1	-0.2	0.4	0.3	0.4	-0.1	0.1	-0.7	0	0.1
G	0.3	-0.3	-0.6	-0.1	-0.3	0.4	-0.1	0.2	0.1	-0.3	0.3	0.2	-0.2	-0.5	0.2	-0.2	0	-0.2	0.2	0.2
P	-0.3	-0.3	-0.4	0.3	-0.4	-0.3	-0.1	-0.1	0.1	-0.1	0.1	0.3	-0.1	0.2	0.5	0	-0.5	0.2	-0.1	0
C	0.2	-0.5	-0.6	-0.1	-0.5	-0.2	-0.4	1.2	0.6	-0.3	0.1	-0.2	0.1	0.5	0	-0.1	-0.6	0.5	0.1	-0.2

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0139	0.3	0.1	0.7	1.3	0.8	0	-0.8	0.2	-0.8	0	-0.2	0.5	-0.3	-0.3	0.3	0.6	0.7	-0.8	-1.5	-0.6
0197	0.7	0.4	1.1	1.9	1	0.6	-1.1	-0.2	-0.3	-1	-0.6	-0.4	-1	-0.5	-0.7	0.2	0.9	-0.3	0.5	-0.8

Select residue pair below:

i_j	Score	Prob
0175_0197	1.222	0.98
0183_0197	1.045	0.94
0197_0200	0.699	0.60
0139_0197	0.638	0.50

Local Interactions:

i_j

Score

Prob

See all coupling residues
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